Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Pif1Q80SX8 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Pif1Q80SX8 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pif1Q80SX8 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pif1Q80SX8 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pif1Q80SX8 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pif1Q80SX8 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Pif1Q80SX8 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pif1Q80SX8 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.94□□□□□ -0.18
Pif1Q80SX8 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pif1Q80SX8 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pif1Q80SX8 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pif1Q80SX8 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pif1Q80SX8 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pif1Q80SX8 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.94□□□□□ -0.18
Pif1Q80SX8 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.94□□□□□ -0.18
Pif1Q80SX8 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.94□□□□□ -0.18
Pif1Q80SX8 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.94□□□□□ -0.18
Pif1Q80SX8 Gm2272-201ENSMUST00000194903 582 ntBASIC13.94□□□□□ -0.18
Pif1Q80SX8 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC13.94□□□□□ -0.18
Pif1Q80SX8 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.94□□□□□ -0.18
Pif1Q80SX8 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.94□□□□□ -0.18
Pif1Q80SX8 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pif1Q80SX8 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pif1Q80SX8 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pif1Q80SX8 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pif1Q80SX8 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Pif1Q80SX8 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC13.94□□□□□ -0.18
Pif1Q80SX8 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pif1Q80SX8 AC153526.5-201ENSMUST00000218661 2147 ntBASIC13.94□□□□□ -0.18
Pif1Q80SX8 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pif1Q80SX8 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pif1Q80SX8 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pif1Q80SX8 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pif1Q80SX8 Ntrk2-205ENSMUST00000224402 2284 ntBASIC13.93□□□□□ -0.18
Pif1Q80SX8 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pif1Q80SX8 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pif1Q80SX8 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pif1Q80SX8 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pif1Q80SX8 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pif1Q80SX8 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pif1Q80SX8 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Pif1Q80SX8 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Pif1Q80SX8 Mir449b-201ENSMUST00000104833 80 ntBASIC13.93□□□□□ -0.18
Pif1Q80SX8 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Pif1Q80SX8 Gm14722-201ENSMUST00000118943 689 ntBASIC13.93□□□□□ -0.18
Pif1Q80SX8 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC13.93□□□□□ -0.18
Pif1Q80SX8 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pif1Q80SX8 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pif1Q80SX8 Gm10499-201ENSMUST00000174094 934 ntBASIC13.93□□□□□ -0.18
Pif1Q80SX8 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Pif1Q80SX8 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13.93□□□□□ -0.18
Pif1Q80SX8 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pif1Q80SX8 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.93□□□□□ -0.18
Pif1Q80SX8 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pif1Q80SX8 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pif1Q80SX8 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Pif1Q80SX8 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.93□□□□□ -0.18
Pif1Q80SX8 Gm10154-201ENSMUST00000084445 354 ntBASIC13.93□□□□□ -0.18
Pif1Q80SX8 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.93□□□□□ -0.18
Pif1Q80SX8 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pif1Q80SX8 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pif1Q80SX8 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pif1Q80SX8 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pif1Q80SX8 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pif1Q80SX8 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pif1Q80SX8 Prkcz2-201ENSMUST00000206136 1756 ntBASIC13.93□□□□□ -0.18
Pif1Q80SX8 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC13.93□□□□□ -0.18
Pif1Q80SX8 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pif1Q80SX8 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Pif1Q80SX8 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pif1Q80SX8 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pif1Q80SX8 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pif1Q80SX8 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pif1Q80SX8 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pif1Q80SX8 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pif1Q80SX8 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pif1Q80SX8 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Pif1Q80SX8 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pif1Q80SX8 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Pif1Q80SX8 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pif1Q80SX8 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.92□□□□□ -0.18
Pif1Q80SX8 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pif1Q80SX8 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.92□□□□□ -0.18
Pif1Q80SX8 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC13.92□□□□□ -0.18
Pif1Q80SX8 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pif1Q80SX8 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Pif1Q80SX8 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pif1Q80SX8 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pif1Q80SX8 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pif1Q80SX8 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pif1Q80SX8 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pif1Q80SX8 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Pif1Q80SX8 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pif1Q80SX8 AC025913.2-201ENSMUST00000220136 1766 ntBASIC13.92□□□□□ -0.18
Pif1Q80SX8 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pif1Q80SX8 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pif1Q80SX8 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pif1Q80SX8 Gm10652-201ENSMUST00000199790 2622 ntBASIC13.92□□□□□ -0.18
Pif1Q80SX8 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms