Protein–RNA interactions for Protein: Q7TSG5

Sh3d21, SH3 domain-containing protein 21, mousemouse

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d21Q7TSG5 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sh3d21Q7TSG5 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC16.55■□□□□ 0.24
Sh3d21Q7TSG5 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sh3d21Q7TSG5 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC16.55■□□□□ 0.24
Sh3d21Q7TSG5 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sh3d21Q7TSG5 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sh3d21Q7TSG5 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Sh3d21Q7TSG5 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Sh3d21Q7TSG5 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC16.55■□□□□ 0.24
Sh3d21Q7TSG5 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sh3d21Q7TSG5 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sh3d21Q7TSG5 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Sh3d21Q7TSG5 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Sh3d21Q7TSG5 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sh3d21Q7TSG5 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sh3d21Q7TSG5 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Sh3d21Q7TSG5 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sh3d21Q7TSG5 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sh3d21Q7TSG5 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sh3d21Q7TSG5 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sh3d21Q7TSG5 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sh3d21Q7TSG5 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sh3d21Q7TSG5 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sh3d21Q7TSG5 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sh3d21Q7TSG5 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sh3d21Q7TSG5 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC16.54■□□□□ 0.24
Sh3d21Q7TSG5 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sh3d21Q7TSG5 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sh3d21Q7TSG5 Gm9449-201ENSMUST00000207265 1011 ntBASIC16.54■□□□□ 0.24
Sh3d21Q7TSG5 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC16.54■□□□□ 0.24
Sh3d21Q7TSG5 Gm45167-201ENSMUST00000208007 322 ntBASIC16.54■□□□□ 0.24
Sh3d21Q7TSG5 AC138767.1-201ENSMUST00000222661 415 ntBASIC16.54■□□□□ 0.24
Sh3d21Q7TSG5 Gm15590-201ENSMUST00000078419 552 ntBASIC16.54■□□□□ 0.24
Sh3d21Q7TSG5 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sh3d21Q7TSG5 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sh3d21Q7TSG5 Gm7901-201ENSMUST00000120430 1597 ntBASIC16.54■□□□□ 0.24
Sh3d21Q7TSG5 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sh3d21Q7TSG5 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sh3d21Q7TSG5 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sh3d21Q7TSG5 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sh3d21Q7TSG5 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sh3d21Q7TSG5 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sh3d21Q7TSG5 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sh3d21Q7TSG5 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Sh3d21Q7TSG5 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC16.53■□□□□ 0.24
Sh3d21Q7TSG5 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sh3d21Q7TSG5 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sh3d21Q7TSG5 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Sh3d21Q7TSG5 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Sh3d21Q7TSG5 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sh3d21Q7TSG5 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Sh3d21Q7TSG5 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sh3d21Q7TSG5 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sh3d21Q7TSG5 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC16.53■□□□□ 0.24
Sh3d21Q7TSG5 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sh3d21Q7TSG5 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sh3d21Q7TSG5 Gm2651-201ENSMUST00000203560 838 ntBASIC16.53■□□□□ 0.24
Sh3d21Q7TSG5 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sh3d21Q7TSG5 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Sh3d21Q7TSG5 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.53■□□□□ 0.24
Sh3d21Q7TSG5 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sh3d21Q7TSG5 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
Sh3d21Q7TSG5 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sh3d21Q7TSG5 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Sh3d21Q7TSG5 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC16.53■□□□□ 0.24
Sh3d21Q7TSG5 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sh3d21Q7TSG5 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sh3d21Q7TSG5 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sh3d21Q7TSG5 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sh3d21Q7TSG5 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sh3d21Q7TSG5 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sh3d21Q7TSG5 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sh3d21Q7TSG5 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sh3d21Q7TSG5 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sh3d21Q7TSG5 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sh3d21Q7TSG5 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sh3d21Q7TSG5 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sh3d21Q7TSG5 Gm13036-201ENSMUST00000117799 748 ntBASIC16.52■□□□□ 0.24
Sh3d21Q7TSG5 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC16.52■□□□□ 0.24
Sh3d21Q7TSG5 Mir5126-201ENSMUST00000175513 77 ntBASIC16.52■□□□□ 0.24
Sh3d21Q7TSG5 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Sh3d21Q7TSG5 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC16.52■□□□□ 0.24
Sh3d21Q7TSG5 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC16.52■□□□□ 0.24
Sh3d21Q7TSG5 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Sh3d21Q7TSG5 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sh3d21Q7TSG5 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sh3d21Q7TSG5 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sh3d21Q7TSG5 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sh3d21Q7TSG5 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC16.52■□□□□ 0.24
Sh3d21Q7TSG5 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC16.52■□□□□ 0.24
Sh3d21Q7TSG5 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sh3d21Q7TSG5 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Sh3d21Q7TSG5 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Sh3d21Q7TSG5 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sh3d21Q7TSG5 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sh3d21Q7TSG5 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sh3d21Q7TSG5 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.23
Sh3d21Q7TSG5 Gm45293-201ENSMUST00000209754 1812 ntBASIC16.52■□□□□ 0.23
Sh3d21Q7TSG5 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sh3d21Q7TSG5 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms