Protein–RNA interactions for Protein: Q7TPQ3

Shprh, E3 ubiquitin-protein ligase SHPRH, mousemouse

Predictions only

Length 1,674 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShprhQ7TPQ3 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ShprhQ7TPQ3 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
ShprhQ7TPQ3 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ShprhQ7TPQ3 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ShprhQ7TPQ3 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ShprhQ7TPQ3 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ShprhQ7TPQ3 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ShprhQ7TPQ3 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC21.09■□□□□ 0.97
ShprhQ7TPQ3 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC21.09■□□□□ 0.97
ShprhQ7TPQ3 Gm37917-201ENSMUST00000194711 392 ntBASIC21.09■□□□□ 0.97
ShprhQ7TPQ3 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC21.09■□□□□ 0.97
ShprhQ7TPQ3 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC21.09■□□□□ 0.97
ShprhQ7TPQ3 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
ShprhQ7TPQ3 Gm21009-201ENSMUST00000197169 1669 ntBASIC21.09■□□□□ 0.97
ShprhQ7TPQ3 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ShprhQ7TPQ3 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
ShprhQ7TPQ3 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ShprhQ7TPQ3 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
ShprhQ7TPQ3 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC21.08■□□□□ 0.97
ShprhQ7TPQ3 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
ShprhQ7TPQ3 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC21.08■□□□□ 0.97
ShprhQ7TPQ3 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
ShprhQ7TPQ3 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ShprhQ7TPQ3 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
ShprhQ7TPQ3 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC21.08■□□□□ 0.96
ShprhQ7TPQ3 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
ShprhQ7TPQ3 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC21.08■□□□□ 0.96
ShprhQ7TPQ3 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
ShprhQ7TPQ3 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
ShprhQ7TPQ3 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC21.08■□□□□ 0.96
ShprhQ7TPQ3 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC21.08■□□□□ 0.96
ShprhQ7TPQ3 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
ShprhQ7TPQ3 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
ShprhQ7TPQ3 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
ShprhQ7TPQ3 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
ShprhQ7TPQ3 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.96
ShprhQ7TPQ3 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
ShprhQ7TPQ3 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
ShprhQ7TPQ3 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
ShprhQ7TPQ3 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
ShprhQ7TPQ3 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
ShprhQ7TPQ3 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ShprhQ7TPQ3 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ShprhQ7TPQ3 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
ShprhQ7TPQ3 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
ShprhQ7TPQ3 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ShprhQ7TPQ3 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC21.07■□□□□ 0.96
ShprhQ7TPQ3 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ShprhQ7TPQ3 Gm31326-201ENSMUST00000191856 1048 ntBASIC21.07■□□□□ 0.96
ShprhQ7TPQ3 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC21.07■□□□□ 0.96
ShprhQ7TPQ3 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ShprhQ7TPQ3 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC21.07■□□□□ 0.96
ShprhQ7TPQ3 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC21.07■□□□□ 0.96
ShprhQ7TPQ3 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
ShprhQ7TPQ3 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ShprhQ7TPQ3 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
ShprhQ7TPQ3 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC21.06■□□□□ 0.96
ShprhQ7TPQ3 Gm10275-202ENSMUST00000168697 495 ntBASIC21.06■□□□□ 0.96
ShprhQ7TPQ3 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC21.06■□□□□ 0.96
ShprhQ7TPQ3 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC21.06■□□□□ 0.96
ShprhQ7TPQ3 Gm6916-202ENSMUST00000205523 195 ntBASIC21.06■□□□□ 0.96
ShprhQ7TPQ3 Gm9182-201ENSMUST00000217829 639 ntBASIC21.06■□□□□ 0.96
ShprhQ7TPQ3 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ShprhQ7TPQ3 Gm10275-201ENSMUST00000092620 635 ntBASIC21.06■□□□□ 0.96
ShprhQ7TPQ3 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ShprhQ7TPQ3 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC21.06■□□□□ 0.96
ShprhQ7TPQ3 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
ShprhQ7TPQ3 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ShprhQ7TPQ3 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
ShprhQ7TPQ3 Gm27528-202ENSMUST00000222916 2012 ntBASIC21.06■□□□□ 0.96
ShprhQ7TPQ3 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ShprhQ7TPQ3 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC21.06■□□□□ 0.96
ShprhQ7TPQ3 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
ShprhQ7TPQ3 Gm45667-201ENSMUST00000210380 1316 ntBASIC21.06■□□□□ 0.96
ShprhQ7TPQ3 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ShprhQ7TPQ3 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC21.06■□□□□ 0.96
ShprhQ7TPQ3 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC21.06■□□□□ 0.96
ShprhQ7TPQ3 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ShprhQ7TPQ3 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
ShprhQ7TPQ3 AC125350.2-201ENSMUST00000224737 727 ntBASIC21.05■□□□□ 0.96
ShprhQ7TPQ3 AC121598.1-201ENSMUST00000228224 1019 ntBASIC21.05■□□□□ 0.96
ShprhQ7TPQ3 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC21.05■□□□□ 0.96
ShprhQ7TPQ3 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ShprhQ7TPQ3 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ShprhQ7TPQ3 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
ShprhQ7TPQ3 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ShprhQ7TPQ3 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
ShprhQ7TPQ3 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ShprhQ7TPQ3 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ShprhQ7TPQ3 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ShprhQ7TPQ3 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ShprhQ7TPQ3 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC21.05■□□□□ 0.96
ShprhQ7TPQ3 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ShprhQ7TPQ3 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ShprhQ7TPQ3 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
ShprhQ7TPQ3 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ShprhQ7TPQ3 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ShprhQ7TPQ3 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ShprhQ7TPQ3 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ShprhQ7TPQ3 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms