Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vma21Q78T54 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vma21Q78T54 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vma21Q78T54 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vma21Q78T54 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Vma21Q78T54 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vma21Q78T54 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vma21Q78T54 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Vma21Q78T54 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vma21Q78T54 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vma21Q78T54 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC12.32□□□□□ -0.44
Vma21Q78T54 Gm4459-201ENSMUST00000118750 468 ntBASIC12.32□□□□□ -0.44
Vma21Q78T54 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.32□□□□□ -0.44
Vma21Q78T54 AC158538.2-201ENSMUST00000225455 906 ntBASIC12.32□□□□□ -0.44
Vma21Q78T54 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vma21Q78T54 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vma21Q78T54 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vma21Q78T54 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vma21Q78T54 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vma21Q78T54 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Vma21Q78T54 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
Vma21Q78T54 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC12.32□□□□□ -0.44
Vma21Q78T54 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vma21Q78T54 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vma21Q78T54 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vma21Q78T54 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vma21Q78T54 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vma21Q78T54 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vma21Q78T54 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vma21Q78T54 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC12.32□□□□□ -0.44
Vma21Q78T54 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vma21Q78T54 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vma21Q78T54 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Vma21Q78T54 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Vma21Q78T54 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Vma21Q78T54 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vma21Q78T54 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vma21Q78T54 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vma21Q78T54 Gm11960-202ENSMUST00000181063 2858 ntBASIC12.31□□□□□ -0.44
Vma21Q78T54 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vma21Q78T54 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.31□□□□□ -0.44
Vma21Q78T54 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vma21Q78T54 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC12.31□□□□□ -0.44
Vma21Q78T54 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Vma21Q78T54 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Vma21Q78T54 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Vma21Q78T54 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Vma21Q78T54 AC108846.1-201ENSMUST00000214531 513 ntBASIC12.31□□□□□ -0.44
Vma21Q78T54 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vma21Q78T54 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vma21Q78T54 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vma21Q78T54 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Vma21Q78T54 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
Vma21Q78T54 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vma21Q78T54 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vma21Q78T54 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Vma21Q78T54 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Vma21Q78T54 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.31□□□□□ -0.44
Vma21Q78T54 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vma21Q78T54 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vma21Q78T54 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.31□□□□□ -0.44
Vma21Q78T54 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Vma21Q78T54 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vma21Q78T54 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vma21Q78T54 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vma21Q78T54 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vma21Q78T54 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vma21Q78T54 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vma21Q78T54 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vma21Q78T54 Grk6-207ENSMUST00000225925 2769 ntBASIC12.3□□□□□ -0.44
Vma21Q78T54 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Vma21Q78T54 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Vma21Q78T54 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vma21Q78T54 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.3□□□□□ -0.44
Vma21Q78T54 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vma21Q78T54 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vma21Q78T54 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC12.3□□□□□ -0.44
Vma21Q78T54 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vma21Q78T54 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vma21Q78T54 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vma21Q78T54 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vma21Q78T54 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vma21Q78T54 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Vma21Q78T54 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.3□□□□□ -0.44
Vma21Q78T54 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vma21Q78T54 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vma21Q78T54 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC12.3□□□□□ -0.44
Vma21Q78T54 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.3□□□□□ -0.44
Vma21Q78T54 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vma21Q78T54 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vma21Q78T54 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vma21Q78T54 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC12.3□□□□□ -0.44
Vma21Q78T54 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Vma21Q78T54 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Vma21Q78T54 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Vma21Q78T54 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Vma21Q78T54 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC12.3□□□□□ -0.44
Vma21Q78T54 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Vma21Q78T54 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Vma21Q78T54 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms