Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx55Q6ZPL9 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx55Q6ZPL9 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx55Q6ZPL9 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Ddx55Q6ZPL9 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Ddx55Q6ZPL9 Mir1897-201ENSMUST00000122581 272 ntBASIC17.1■□□□□ 0.33
Ddx55Q6ZPL9 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC17.1■□□□□ 0.33
Ddx55Q6ZPL9 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC17.1■□□□□ 0.33
Ddx55Q6ZPL9 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx55Q6ZPL9 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx55Q6ZPL9 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.1■□□□□ 0.33
Ddx55Q6ZPL9 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx55Q6ZPL9 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC17.1■□□□□ 0.33
Ddx55Q6ZPL9 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx55Q6ZPL9 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx55Q6ZPL9 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx55Q6ZPL9 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx55Q6ZPL9 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx55Q6ZPL9 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx55Q6ZPL9 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx55Q6ZPL9 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC17.09■□□□□ 0.33
Ddx55Q6ZPL9 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx55Q6ZPL9 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC17.09■□□□□ 0.33
Ddx55Q6ZPL9 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC17.09■□□□□ 0.33
Ddx55Q6ZPL9 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC17.09■□□□□ 0.33
Ddx55Q6ZPL9 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Ddx55Q6ZPL9 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx55Q6ZPL9 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx55Q6ZPL9 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx55Q6ZPL9 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Ddx55Q6ZPL9 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx55Q6ZPL9 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx55Q6ZPL9 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Ddx55Q6ZPL9 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ddx55Q6ZPL9 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ddx55Q6ZPL9 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ddx55Q6ZPL9 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ddx55Q6ZPL9 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ddx55Q6ZPL9 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC17.08■□□□□ 0.33
Ddx55Q6ZPL9 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Ddx55Q6ZPL9 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx55Q6ZPL9 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx55Q6ZPL9 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx55Q6ZPL9 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx55Q6ZPL9 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx55Q6ZPL9 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx55Q6ZPL9 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx55Q6ZPL9 Gm15163-201ENSMUST00000120749 1302 ntBASIC17.08■□□□□ 0.32
Ddx55Q6ZPL9 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx55Q6ZPL9 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx55Q6ZPL9 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC17.08■□□□□ 0.32
Ddx55Q6ZPL9 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC17.08■□□□□ 0.32
Ddx55Q6ZPL9 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC17.08■□□□□ 0.32
Ddx55Q6ZPL9 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC17.08■□□□□ 0.32
Ddx55Q6ZPL9 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC17.08■□□□□ 0.32
Ddx55Q6ZPL9 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC17.08■□□□□ 0.32
Ddx55Q6ZPL9 Gm46209-201ENSMUST00000217912 553 ntBASIC17.08■□□□□ 0.32
Ddx55Q6ZPL9 Gm16476-201ENSMUST00000221544 139 ntBASIC17.08■□□□□ 0.32
Ddx55Q6ZPL9 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx55Q6ZPL9 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx55Q6ZPL9 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx55Q6ZPL9 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC17.08■□□□□ 0.32
Ddx55Q6ZPL9 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx55Q6ZPL9 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx55Q6ZPL9 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Ddx55Q6ZPL9 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Ddx55Q6ZPL9 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Ddx55Q6ZPL9 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Ddx55Q6ZPL9 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx55Q6ZPL9 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Ddx55Q6ZPL9 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx55Q6ZPL9 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC17.07■□□□□ 0.32
Ddx55Q6ZPL9 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC17.07■□□□□ 0.32
Ddx55Q6ZPL9 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx55Q6ZPL9 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx55Q6ZPL9 Gm22189-201ENSMUST00000103822 86 ntBASIC17.07■□□□□ 0.32
Ddx55Q6ZPL9 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC17.07■□□□□ 0.32
Ddx55Q6ZPL9 Gm6912-201ENSMUST00000117218 544 ntBASIC17.07■□□□□ 0.32
Ddx55Q6ZPL9 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx55Q6ZPL9 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC17.07■□□□□ 0.32
Ddx55Q6ZPL9 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Ddx55Q6ZPL9 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx55Q6ZPL9 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx55Q6ZPL9 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx55Q6ZPL9 Gm43433-201ENSMUST00000196573 481 ntBASIC17.07■□□□□ 0.32
Ddx55Q6ZPL9 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC17.07■□□□□ 0.32
Ddx55Q6ZPL9 Gm6180-201ENSMUST00000065243 498 ntBASIC17.07■□□□□ 0.32
Ddx55Q6ZPL9 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx55Q6ZPL9 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx55Q6ZPL9 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx55Q6ZPL9 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Ddx55Q6ZPL9 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx55Q6ZPL9 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx55Q6ZPL9 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx55Q6ZPL9 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Ddx55Q6ZPL9 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Ddx55Q6ZPL9 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Ddx55Q6ZPL9 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC17.06■□□□□ 0.32
Ddx55Q6ZPL9 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx55Q6ZPL9 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms