Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Npc1l1Q6T3U4 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Npc1l1Q6T3U4 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC18.05■□□□□ 0.48
Npc1l1Q6T3U4 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC18.05■□□□□ 0.48
Npc1l1Q6T3U4 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Npc1l1Q6T3U4 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Npc1l1Q6T3U4 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC18.05■□□□□ 0.48
Npc1l1Q6T3U4 AC140397.2-201ENSMUST00000224213 834 ntBASIC18.05■□□□□ 0.48
Npc1l1Q6T3U4 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Npc1l1Q6T3U4 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Npc1l1Q6T3U4 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Npc1l1Q6T3U4 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC18.05■□□□□ 0.48
Npc1l1Q6T3U4 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Npc1l1Q6T3U4 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Npc1l1Q6T3U4 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC18.05■□□□□ 0.48
Npc1l1Q6T3U4 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Npc1l1Q6T3U4 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Npc1l1Q6T3U4 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Npc1l1Q6T3U4 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Npc1l1Q6T3U4 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Npc1l1Q6T3U4 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Npc1l1Q6T3U4 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Npc1l1Q6T3U4 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC18.04■□□□□ 0.48
Npc1l1Q6T3U4 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Npc1l1Q6T3U4 CT025555.1-201ENSMUST00000225901 1217 ntBASIC18.04■□□□□ 0.48
Npc1l1Q6T3U4 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Npc1l1Q6T3U4 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Npc1l1Q6T3U4 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
Npc1l1Q6T3U4 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Npc1l1Q6T3U4 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Npc1l1Q6T3U4 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Npc1l1Q6T3U4 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC18.04■□□□□ 0.48
Npc1l1Q6T3U4 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Npc1l1Q6T3U4 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Npc1l1Q6T3U4 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Npc1l1Q6T3U4 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC18.04■□□□□ 0.48
Npc1l1Q6T3U4 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Npc1l1Q6T3U4 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC18.04■□□□□ 0.48
Npc1l1Q6T3U4 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Npc1l1Q6T3U4 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Npc1l1Q6T3U4 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Npc1l1Q6T3U4 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Npc1l1Q6T3U4 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
Npc1l1Q6T3U4 Gm9867-201ENSMUST00000192212 2647 ntBASIC18.04■□□□□ 0.48
Npc1l1Q6T3U4 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Npc1l1Q6T3U4 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Npc1l1Q6T3U4 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Npc1l1Q6T3U4 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Npc1l1Q6T3U4 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Npc1l1Q6T3U4 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Npc1l1Q6T3U4 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Npc1l1Q6T3U4 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
Npc1l1Q6T3U4 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Npc1l1Q6T3U4 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Npc1l1Q6T3U4 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Npc1l1Q6T3U4 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Npc1l1Q6T3U4 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
Npc1l1Q6T3U4 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC18.03■□□□□ 0.48
Npc1l1Q6T3U4 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC18.03■□□□□ 0.48
Npc1l1Q6T3U4 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Npc1l1Q6T3U4 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Npc1l1Q6T3U4 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC18.03■□□□□ 0.48
Npc1l1Q6T3U4 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Npc1l1Q6T3U4 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Npc1l1Q6T3U4 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Npc1l1Q6T3U4 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Npc1l1Q6T3U4 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Npc1l1Q6T3U4 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Npc1l1Q6T3U4 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Npc1l1Q6T3U4 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Npc1l1Q6T3U4 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Npc1l1Q6T3U4 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Npc1l1Q6T3U4 CT025626.1-201ENSMUST00000223735 1455 ntBASIC18.02■□□□□ 0.48
Npc1l1Q6T3U4 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Npc1l1Q6T3U4 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Npc1l1Q6T3U4 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Npc1l1Q6T3U4 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Npc1l1Q6T3U4 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC18.02■□□□□ 0.48
Npc1l1Q6T3U4 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Npc1l1Q6T3U4 Gm10313-201ENSMUST00000095320 1002 ntBASIC18.02■□□□□ 0.48
Npc1l1Q6T3U4 Mxra8os-201ENSMUST00000097740 687 ntBASIC18.02■□□□□ 0.48
Npc1l1Q6T3U4 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Npc1l1Q6T3U4 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Npc1l1Q6T3U4 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Npc1l1Q6T3U4 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Npc1l1Q6T3U4 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Npc1l1Q6T3U4 AC126250.1-201ENSMUST00000228343 1768 ntBASIC18.02■□□□□ 0.48
Npc1l1Q6T3U4 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Npc1l1Q6T3U4 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Npc1l1Q6T3U4 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Npc1l1Q6T3U4 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Npc1l1Q6T3U4 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Npc1l1Q6T3U4 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Npc1l1Q6T3U4 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC18.01■□□□□ 0.47
Npc1l1Q6T3U4 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Npc1l1Q6T3U4 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC18.01■□□□□ 0.47
Npc1l1Q6T3U4 Gm22175-201ENSMUST00000175007 78 ntBASIC18.01■□□□□ 0.47
Npc1l1Q6T3U4 Mir7023-201ENSMUST00000185093 64 ntBASIC18.01■□□□□ 0.47
Npc1l1Q6T3U4 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Npc1l1Q6T3U4 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms