Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Snrnp40Q6PE01 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.24□□□□□ -0.29
Snrnp40Q6PE01 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Snrnp40Q6PE01 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Snrnp40Q6PE01 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Snrnp40Q6PE01 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Snrnp40Q6PE01 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Snrnp40Q6PE01 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Snrnp40Q6PE01 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Snrnp40Q6PE01 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Snrnp40Q6PE01 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Snrnp40Q6PE01 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Snrnp40Q6PE01 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Snrnp40Q6PE01 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Snrnp40Q6PE01 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Snrnp40Q6PE01 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Snrnp40Q6PE01 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Snrnp40Q6PE01 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Snrnp40Q6PE01 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Snrnp40Q6PE01 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Snrnp40Q6PE01 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Snrnp40Q6PE01 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC13.23□□□□□ -0.29
Snrnp40Q6PE01 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.23□□□□□ -0.29
Snrnp40Q6PE01 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Snrnp40Q6PE01 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Snrnp40Q6PE01 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Snrnp40Q6PE01 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Snrnp40Q6PE01 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Snrnp40Q6PE01 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Snrnp40Q6PE01 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Snrnp40Q6PE01 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Snrnp40Q6PE01 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Snrnp40Q6PE01 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.23□□□□□ -0.29
Snrnp40Q6PE01 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Snrnp40Q6PE01 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Snrnp40Q6PE01 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Snrnp40Q6PE01 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Snrnp40Q6PE01 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Snrnp40Q6PE01 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Snrnp40Q6PE01 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Snrnp40Q6PE01 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Snrnp40Q6PE01 Ntrk2-205ENSMUST00000224402 2284 ntBASIC13.22□□□□□ -0.29
Snrnp40Q6PE01 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Snrnp40Q6PE01 Gm24543-201ENSMUST00000103867 82 ntBASIC13.22□□□□□ -0.29
Snrnp40Q6PE01 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Snrnp40Q6PE01 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Snrnp40Q6PE01 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Snrnp40Q6PE01 Gm14928-201ENSMUST00000120198 477 ntBASIC13.22□□□□□ -0.29
Snrnp40Q6PE01 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Snrnp40Q6PE01 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.22□□□□□ -0.29
Snrnp40Q6PE01 Gm18187-201ENSMUST00000196476 984 ntBASIC13.22□□□□□ -0.29
Snrnp40Q6PE01 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.22□□□□□ -0.29
Snrnp40Q6PE01 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.22□□□□□ -0.29
Snrnp40Q6PE01 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.22□□□□□ -0.29
Snrnp40Q6PE01 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.22□□□□□ -0.29
Snrnp40Q6PE01 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Snrnp40Q6PE01 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Snrnp40Q6PE01 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Snrnp40Q6PE01 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Snrnp40Q6PE01 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Snrnp40Q6PE01 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Snrnp40Q6PE01 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Snrnp40Q6PE01 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Snrnp40Q6PE01 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Snrnp40Q6PE01 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Snrnp40Q6PE01 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
Snrnp40Q6PE01 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Snrnp40Q6PE01 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
Snrnp40Q6PE01 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Snrnp40Q6PE01 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Snrnp40Q6PE01 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Snrnp40Q6PE01 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Snrnp40Q6PE01 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Snrnp40Q6PE01 AC069562.2-201ENSMUST00000224644 2146 ntBASIC13.21□□□□□ -0.29
Snrnp40Q6PE01 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Snrnp40Q6PE01 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Snrnp40Q6PE01 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.21□□□□□ -0.29
Snrnp40Q6PE01 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.21□□□□□ -0.29
Snrnp40Q6PE01 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.21□□□□□ -0.29
Snrnp40Q6PE01 Gm12859-201ENSMUST00000117834 427 ntBASIC13.21□□□□□ -0.29
Snrnp40Q6PE01 Gm15321-201ENSMUST00000121290 288 ntBASIC13.21□□□□□ -0.29
Snrnp40Q6PE01 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Snrnp40Q6PE01 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.21□□□□□ -0.29
Snrnp40Q6PE01 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Snrnp40Q6PE01 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13.21□□□□□ -0.29
Snrnp40Q6PE01 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Snrnp40Q6PE01 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Snrnp40Q6PE01 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Snrnp40Q6PE01 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Snrnp40Q6PE01 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Snrnp40Q6PE01 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Snrnp40Q6PE01 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Snrnp40Q6PE01 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Snrnp40Q6PE01 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC13.21□□□□□ -0.29
Snrnp40Q6PE01 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Snrnp40Q6PE01 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Snrnp40Q6PE01 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Snrnp40Q6PE01 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Snrnp40Q6PE01 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Snrnp40Q6PE01 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms