Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.33■□□□□ 0.04
Casc4Q6P2L7 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Casc4Q6P2L7 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Casc4Q6P2L7 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
Casc4Q6P2L7 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Casc4Q6P2L7 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Casc4Q6P2L7 BC037039-201ENSMUST00000192003 2205 ntBASIC15.33■□□□□ 0.04
Casc4Q6P2L7 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Casc4Q6P2L7 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Casc4Q6P2L7 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Casc4Q6P2L7 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Casc4Q6P2L7 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Casc4Q6P2L7 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Casc4Q6P2L7 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Casc4Q6P2L7 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC15.33■□□□□ 0.04
Casc4Q6P2L7 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Casc4Q6P2L7 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Casc4Q6P2L7 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Casc4Q6P2L7 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Casc4Q6P2L7 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Casc4Q6P2L7 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Casc4Q6P2L7 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Casc4Q6P2L7 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Casc4Q6P2L7 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Casc4Q6P2L7 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Casc4Q6P2L7 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Casc4Q6P2L7 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Casc4Q6P2L7 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Casc4Q6P2L7 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Casc4Q6P2L7 Gm11453-201ENSMUST00000117318 1007 ntBASIC15.32■□□□□ 0.04
Casc4Q6P2L7 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Casc4Q6P2L7 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC15.32■□□□□ 0.04
Casc4Q6P2L7 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC15.32■□□□□ 0.04
Casc4Q6P2L7 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC15.32■□□□□ 0.04
Casc4Q6P2L7 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC15.32■□□□□ 0.04
Casc4Q6P2L7 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Casc4Q6P2L7 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Casc4Q6P2L7 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Casc4Q6P2L7 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Casc4Q6P2L7 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.32■□□□□ 0.04
Casc4Q6P2L7 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Casc4Q6P2L7 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Casc4Q6P2L7 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.32■□□□□ 0.04
Casc4Q6P2L7 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
Casc4Q6P2L7 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Casc4Q6P2L7 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Casc4Q6P2L7 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Casc4Q6P2L7 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Casc4Q6P2L7 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Casc4Q6P2L7 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Casc4Q6P2L7 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Casc4Q6P2L7 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Casc4Q6P2L7 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Casc4Q6P2L7 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Casc4Q6P2L7 Gm4899-201ENSMUST00000178708 719 ntBASIC15.31■□□□□ 0.04
Casc4Q6P2L7 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC15.31■□□□□ 0.04
Casc4Q6P2L7 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.31■□□□□ 0.04
Casc4Q6P2L7 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Casc4Q6P2L7 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Casc4Q6P2L7 AC157650.3-201ENSMUST00000225058 1476 ntBASIC15.31■□□□□ 0.04
Casc4Q6P2L7 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Casc4Q6P2L7 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Casc4Q6P2L7 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Casc4Q6P2L7 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Casc4Q6P2L7 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Casc4Q6P2L7 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Casc4Q6P2L7 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Casc4Q6P2L7 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Casc4Q6P2L7 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Casc4Q6P2L7 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Casc4Q6P2L7 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Casc4Q6P2L7 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Casc4Q6P2L7 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC15.3■□□□□ 0.04
Casc4Q6P2L7 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Casc4Q6P2L7 Gm10499-201ENSMUST00000174094 934 ntBASIC15.3■□□□□ 0.04
Casc4Q6P2L7 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Casc4Q6P2L7 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Casc4Q6P2L7 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Casc4Q6P2L7 AC084391.1-201ENSMUST00000200651 141 ntBASIC15.3■□□□□ 0.04
Casc4Q6P2L7 Gm18206-201ENSMUST00000207027 926 ntBASIC15.3■□□□□ 0.04
Casc4Q6P2L7 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Casc4Q6P2L7 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Casc4Q6P2L7 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Casc4Q6P2L7 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Casc4Q6P2L7 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Casc4Q6P2L7 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Casc4Q6P2L7 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Casc4Q6P2L7 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Casc4Q6P2L7 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Casc4Q6P2L7 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.29■□□□□ 0.04
Casc4Q6P2L7 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
Casc4Q6P2L7 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Casc4Q6P2L7 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Casc4Q6P2L7 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Casc4Q6P2L7 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Casc4Q6P2L7 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Casc4Q6P2L7 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Casc4Q6P2L7 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Casc4Q6P2L7 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15.29■□□□□ 0.04
Casc4Q6P2L7 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms