Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col7a1Q63870 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col7a1Q63870 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.29□□□□□ -0.44
Col7a1Q63870 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col7a1Q63870 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col7a1Q63870 Gm12997-201ENSMUST00000120207 640 ntBASIC12.28□□□□□ -0.44
Col7a1Q63870 Gm15429-201ENSMUST00000151268 798 ntBASIC12.28□□□□□ -0.44
Col7a1Q63870 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col7a1Q63870 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.28□□□□□ -0.44
Col7a1Q63870 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col7a1Q63870 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Col7a1Q63870 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col7a1Q63870 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col7a1Q63870 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col7a1Q63870 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col7a1Q63870 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col7a1Q63870 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col7a1Q63870 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC12.28□□□□□ -0.44
Col7a1Q63870 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.28□□□□□ -0.44
Col7a1Q63870 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.28□□□□□ -0.44
Col7a1Q63870 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.28□□□□□ -0.44
Col7a1Q63870 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.28□□□□□ -0.44
Col7a1Q63870 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.28□□□□□ -0.44
Col7a1Q63870 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC12.28□□□□□ -0.44
Col7a1Q63870 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col7a1Q63870 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col7a1Q63870 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col7a1Q63870 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col7a1Q63870 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col7a1Q63870 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.27□□□□□ -0.44
Col7a1Q63870 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Col7a1Q63870 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col7a1Q63870 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.44
Col7a1Q63870 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col7a1Q63870 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Col7a1Q63870 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col7a1Q63870 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col7a1Q63870 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col7a1Q63870 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col7a1Q63870 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col7a1Q63870 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col7a1Q63870 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Col7a1Q63870 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC12.27□□□□□ -0.44
Col7a1Q63870 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col7a1Q63870 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col7a1Q63870 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.45
Col7a1Q63870 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.27□□□□□ -0.45
Col7a1Q63870 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col7a1Q63870 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.27□□□□□ -0.45
Col7a1Q63870 Gm5363-201ENSMUST00000211927 938 ntBASIC12.27□□□□□ -0.45
Col7a1Q63870 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col7a1Q63870 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Col7a1Q63870 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col7a1Q63870 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col7a1Q63870 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col7a1Q63870 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col7a1Q63870 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col7a1Q63870 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
Col7a1Q63870 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Col7a1Q63870 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col7a1Q63870 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC12.26□□□□□ -0.45
Col7a1Q63870 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC12.26□□□□□ -0.45
Col7a1Q63870 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col7a1Q63870 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.26□□□□□ -0.45
Col7a1Q63870 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
Col7a1Q63870 Gm38002-201ENSMUST00000193255 180 ntBASIC12.26□□□□□ -0.45
Col7a1Q63870 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col7a1Q63870 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col7a1Q63870 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col7a1Q63870 Gm45751-201ENSMUST00000210185 1573 ntBASIC12.26□□□□□ -0.45
Col7a1Q63870 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col7a1Q63870 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col7a1Q63870 Gm16177-201ENSMUST00000120728 718 ntBASIC12.26□□□□□ -0.45
Col7a1Q63870 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col7a1Q63870 Gm22334-201ENSMUST00000158070 133 ntBASIC12.26□□□□□ -0.45
Col7a1Q63870 CT009718.3-201ENSMUST00000221116 367 ntBASIC12.26□□□□□ -0.45
Col7a1Q63870 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col7a1Q63870 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Col7a1Q63870 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col7a1Q63870 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col7a1Q63870 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Col7a1Q63870 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col7a1Q63870 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC12.25□□□□□ -0.45
Col7a1Q63870 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC12.25□□□□□ -0.45
Col7a1Q63870 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.25□□□□□ -0.45
Col7a1Q63870 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col7a1Q63870 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Col7a1Q63870 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col7a1Q63870 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col7a1Q63870 Gm13342-201ENSMUST00000121055 207 ntBASIC12.25□□□□□ -0.45
Col7a1Q63870 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Col7a1Q63870 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col7a1Q63870 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.25□□□□□ -0.45
Col7a1Q63870 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.25□□□□□ -0.45
Col7a1Q63870 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col7a1Q63870 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col7a1Q63870 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Col7a1Q63870 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col7a1Q63870 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col7a1Q63870 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms