Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Foxc1Q61572 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Foxc1Q61572 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Foxc1Q61572 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Foxc1Q61572 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Foxc1Q61572 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Foxc1Q61572 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Foxc1Q61572 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Foxc1Q61572 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Foxc1Q61572 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Foxc1Q61572 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Foxc1Q61572 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Foxc1Q61572 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Foxc1Q61572 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Foxc1Q61572 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC11.15□□□□□ -0.62
Foxc1Q61572 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Foxc1Q61572 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Foxc1Q61572 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC11.15□□□□□ -0.62
Foxc1Q61572 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Foxc1Q61572 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC11.15□□□□□ -0.62
Foxc1Q61572 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC11.15□□□□□ -0.62
Foxc1Q61572 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC11.15□□□□□ -0.62
Foxc1Q61572 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC11.15□□□□□ -0.62
Foxc1Q61572 Gm5364-201ENSMUST00000216789 889 ntBASIC11.15□□□□□ -0.62
Foxc1Q61572 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC11.15□□□□□ -0.62
Foxc1Q61572 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC11.15□□□□□ -0.62
Foxc1Q61572 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Foxc1Q61572 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Foxc1Q61572 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Foxc1Q61572 Olfr128-201ENSMUST00000080231 1050 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Foxc1Q61572 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Foxc1Q61572 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Foxc1Q61572 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Foxc1Q61572 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Foxc1Q61572 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Foxc1Q61572 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Foxc1Q61572 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Foxc1Q61572 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Foxc1Q61572 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Foxc1Q61572 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Foxc1Q61572 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Foxc1Q61572 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Foxc1Q61572 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Foxc1Q61572 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC11.15□□□□□ -0.63
Foxc1Q61572 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Foxc1Q61572 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Foxc1Q61572 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
Foxc1Q61572 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC11.15□□□□□ -0.63
Foxc1Q61572 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Foxc1Q61572 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Foxc1Q61572 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Foxc1Q61572 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Foxc1Q61572 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Foxc1Q61572 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Foxc1Q61572 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Foxc1Q61572 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Foxc1Q61572 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Foxc1Q61572 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Foxc1Q61572 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Foxc1Q61572 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Foxc1Q61572 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Foxc1Q61572 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Foxc1Q61572 Gm38327-201ENSMUST00000195852 1755 ntBASIC11.14□□□□□ -0.63
Foxc1Q61572 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Foxc1Q61572 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Foxc1Q61572 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Foxc1Q61572 Gm44729-201ENSMUST00000206759 2052 ntBASIC11.14□□□□□ -0.63
Foxc1Q61572 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Foxc1Q61572 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC11.14□□□□□ -0.63
Foxc1Q61572 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Foxc1Q61572 Gm11780-201ENSMUST00000136880 516 ntBASIC11.14□□□□□ -0.63
Foxc1Q61572 Gm7230-201ENSMUST00000173026 815 ntBASIC11.14□□□□□ -0.63
Foxc1Q61572 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Foxc1Q61572 Mir5126-201ENSMUST00000175513 77 ntBASIC11.14□□□□□ -0.63
Foxc1Q61572 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Foxc1Q61572 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Foxc1Q61572 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Foxc1Q61572 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC11.14□□□□□ -0.63
Foxc1Q61572 AC154828.2-201ENSMUST00000220908 1070 ntBASIC11.14□□□□□ -0.63
Foxc1Q61572 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Foxc1Q61572 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC11.14□□□□□ -0.63
Foxc1Q61572 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Foxc1Q61572 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Foxc1Q61572 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Foxc1Q61572 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC11.14□□□□□ -0.63
Foxc1Q61572 Prl6a1-201ENSMUST00000091679 1093 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Foxc1Q61572 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Foxc1Q61572 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
Foxc1Q61572 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Foxc1Q61572 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Foxc1Q61572 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Foxc1Q61572 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Foxc1Q61572 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Foxc1Q61572 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Foxc1Q61572 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Foxc1Q61572 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Foxc1Q61572 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Foxc1Q61572 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Foxc1Q61572 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Foxc1Q61572 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms