Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ecm1Q61508 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Ecm1Q61508 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.64■□□□□ 0.25
Ecm1Q61508 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ecm1Q61508 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC16.64■□□□□ 0.25
Ecm1Q61508 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ecm1Q61508 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC16.64■□□□□ 0.25
Ecm1Q61508 AC124732.1-201ENSMUST00000221551 910 ntBASIC16.64■□□□□ 0.25
Ecm1Q61508 Shd-206ENSMUST00000225145 998 ntBASIC16.64■□□□□ 0.25
Ecm1Q61508 AC090659.2-201ENSMUST00000225378 1186 ntBASIC16.64■□□□□ 0.25
Ecm1Q61508 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ecm1Q61508 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Ecm1Q61508 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Ecm1Q61508 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ecm1Q61508 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ecm1Q61508 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.64■□□□□ 0.25
Ecm1Q61508 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ecm1Q61508 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Ecm1Q61508 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ecm1Q61508 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ecm1Q61508 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ecm1Q61508 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ecm1Q61508 App-207ENSMUST00000227737 2827 ntBASIC16.64■□□□□ 0.25
Ecm1Q61508 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Ecm1Q61508 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ecm1Q61508 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Ecm1Q61508 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ecm1Q61508 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ecm1Q61508 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ecm1Q61508 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ecm1Q61508 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ecm1Q61508 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ecm1Q61508 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ecm1Q61508 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Ecm1Q61508 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC16.63■□□□□ 0.25
Ecm1Q61508 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Ecm1Q61508 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ecm1Q61508 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC16.63■□□□□ 0.25
Ecm1Q61508 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ecm1Q61508 AC135669.1-201ENSMUST00000213585 412 ntBASIC16.63■□□□□ 0.25
Ecm1Q61508 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC16.63■□□□□ 0.25
Ecm1Q61508 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ecm1Q61508 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC16.63■□□□□ 0.25
Ecm1Q61508 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ecm1Q61508 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ecm1Q61508 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Ecm1Q61508 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
Ecm1Q61508 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ecm1Q61508 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ecm1Q61508 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ecm1Q61508 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ecm1Q61508 Gm3365-201ENSMUST00000216296 1480 ntBASIC16.62■□□□□ 0.25
Ecm1Q61508 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ecm1Q61508 Gm15321-201ENSMUST00000121290 288 ntBASIC16.62■□□□□ 0.25
Ecm1Q61508 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ecm1Q61508 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC16.62■□□□□ 0.25
Ecm1Q61508 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ecm1Q61508 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ecm1Q61508 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ecm1Q61508 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ecm1Q61508 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Ecm1Q61508 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.62■□□□□ 0.25
Ecm1Q61508 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Ecm1Q61508 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ecm1Q61508 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ecm1Q61508 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ecm1Q61508 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ecm1Q61508 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ecm1Q61508 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ecm1Q61508 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
Ecm1Q61508 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
Ecm1Q61508 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ecm1Q61508 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC16.61■□□□□ 0.25
Ecm1Q61508 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC16.61■□□□□ 0.25
Ecm1Q61508 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ecm1Q61508 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Ecm1Q61508 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC16.61■□□□□ 0.25
Ecm1Q61508 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ecm1Q61508 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ecm1Q61508 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.61■□□□□ 0.25
Ecm1Q61508 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ecm1Q61508 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ecm1Q61508 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ecm1Q61508 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Ecm1Q61508 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ecm1Q61508 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ecm1Q61508 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ecm1Q61508 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ecm1Q61508 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ecm1Q61508 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ecm1Q61508 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ecm1Q61508 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ecm1Q61508 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC16.6■□□□□ 0.25
Ecm1Q61508 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC16.6■□□□□ 0.25
Ecm1Q61508 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ecm1Q61508 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ecm1Q61508 Gm24694-201ENSMUST00000180054 110 ntBASIC16.6■□□□□ 0.25
Ecm1Q61508 Gm27663-201ENSMUST00000184839 110 ntBASIC16.6■□□□□ 0.25
Ecm1Q61508 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ecm1Q61508 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms