Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcd1Q61466 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcd1Q61466 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Smarcd1Q61466 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcd1Q61466 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Smarcd1Q61466 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcd1Q61466 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcd1Q61466 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Smarcd1Q61466 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Smarcd1Q61466 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcd1Q61466 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC15.71■□□□□ 0.11
Smarcd1Q61466 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC15.71■□□□□ 0.11
Smarcd1Q61466 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcd1Q61466 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Smarcd1Q61466 AC151286.1-201ENSMUST00000198489 145 ntBASIC15.71■□□□□ 0.11
Smarcd1Q61466 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC15.71■□□□□ 0.11
Smarcd1Q61466 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC15.71■□□□□ 0.11
Smarcd1Q61466 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcd1Q61466 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcd1Q61466 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcd1Q61466 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC15.71■□□□□ 0.11
Smarcd1Q61466 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcd1Q61466 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcd1Q61466 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Smarcd1Q61466 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcd1Q61466 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcd1Q61466 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcd1Q61466 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcd1Q61466 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcd1Q61466 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcd1Q61466 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Smarcd1Q61466 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcd1Q61466 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Smarcd1Q61466 Gm15593-201ENSMUST00000122085 1008 ntBASIC15.7■□□□□ 0.1
Smarcd1Q61466 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC15.7■□□□□ 0.1
Smarcd1Q61466 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcd1Q61466 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC15.7■□□□□ 0.1
Smarcd1Q61466 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC15.7■□□□□ 0.1
Smarcd1Q61466 CT025555.1-201ENSMUST00000225901 1217 ntBASIC15.7■□□□□ 0.1
Smarcd1Q61466 AC155252.2-201ENSMUST00000226946 680 ntBASIC15.7■□□□□ 0.1
Smarcd1Q61466 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcd1Q61466 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcd1Q61466 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcd1Q61466 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcd1Q61466 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Smarcd1Q61466 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcd1Q61466 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Smarcd1Q61466 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Smarcd1Q61466 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcd1Q61466 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcd1Q61466 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
Smarcd1Q61466 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcd1Q61466 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smarcd1Q61466 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC15.69■□□□□ 0.1
Smarcd1Q61466 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcd1Q61466 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcd1Q61466 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcd1Q61466 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcd1Q61466 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcd1Q61466 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcd1Q61466 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcd1Q61466 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcd1Q61466 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Smarcd1Q61466 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcd1Q61466 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcd1Q61466 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcd1Q61466 Gm16026-204ENSMUST00000162652 683 ntBASIC15.69■□□□□ 0.1
Smarcd1Q61466 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcd1Q61466 Gm20553-201ENSMUST00000204205 844 ntBASIC15.69■□□□□ 0.1
Smarcd1Q61466 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC15.69■□□□□ 0.1
Smarcd1Q61466 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC15.69■□□□□ 0.1
Smarcd1Q61466 Chchd1-203ENSMUST00000224633 557 ntBASIC15.69■□□□□ 0.1
Smarcd1Q61466 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcd1Q61466 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Smarcd1Q61466 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcd1Q61466 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcd1Q61466 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcd1Q61466 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC15.69■□□□□ 0.1
Smarcd1Q61466 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcd1Q61466 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcd1Q61466 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcd1Q61466 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcd1Q61466 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC15.69■□□□□ 0.1
Smarcd1Q61466 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcd1Q61466 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcd1Q61466 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcd1Q61466 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC15.68■□□□□ 0.1
Smarcd1Q61466 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcd1Q61466 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
Smarcd1Q61466 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcd1Q61466 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcd1Q61466 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcd1Q61466 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcd1Q61466 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Smarcd1Q61466 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Smarcd1Q61466 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcd1Q61466 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcd1Q61466 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Smarcd1Q61466 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC15.68■□□□□ 0.1
Smarcd1Q61466 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms