Protein–RNA interactions for Protein: Q61043

Nin, Ninein, mousemouse

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NinQ61043 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NinQ61043 Gm27892-201ENSMUST00000185017 106 ntBASIC17.26■□□□□ 0.35
NinQ61043 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC17.26■□□□□ 0.35
NinQ61043 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NinQ61043 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
NinQ61043 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NinQ61043 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NinQ61043 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NinQ61043 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NinQ61043 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
NinQ61043 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NinQ61043 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.26■□□□□ 0.35
NinQ61043 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NinQ61043 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
NinQ61043 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NinQ61043 Gm12585-201ENSMUST00000117307 290 ntBASIC17.26■□□□□ 0.35
NinQ61043 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NinQ61043 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NinQ61043 Gm19220-201ENSMUST00000222682 803 ntBASIC17.26■□□□□ 0.35
NinQ61043 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
NinQ61043 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NinQ61043 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NinQ61043 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NinQ61043 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NinQ61043 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC17.25■□□□□ 0.35
NinQ61043 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NinQ61043 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NinQ61043 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC17.25■□□□□ 0.35
NinQ61043 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
NinQ61043 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
NinQ61043 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NinQ61043 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NinQ61043 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NinQ61043 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NinQ61043 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NinQ61043 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.25■□□□□ 0.35
NinQ61043 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
NinQ61043 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
NinQ61043 Gm37230-201ENSMUST00000194491 818 ntBASIC17.25■□□□□ 0.35
NinQ61043 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NinQ61043 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NinQ61043 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NinQ61043 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NinQ61043 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NinQ61043 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NinQ61043 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.24■□□□□ 0.35
NinQ61043 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC17.24■□□□□ 0.35
NinQ61043 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NinQ61043 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NinQ61043 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC17.24■□□□□ 0.35
NinQ61043 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.24■□□□□ 0.35
NinQ61043 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NinQ61043 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NinQ61043 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NinQ61043 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NinQ61043 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NinQ61043 Gm9200-201ENSMUST00000118513 1354 ntBASIC17.23■□□□□ 0.35
NinQ61043 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NinQ61043 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NinQ61043 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC17.23■□□□□ 0.35
NinQ61043 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NinQ61043 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NinQ61043 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.23■□□□□ 0.35
NinQ61043 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC17.23■□□□□ 0.35
NinQ61043 Gm12390-201ENSMUST00000117897 397 ntBASIC17.23■□□□□ 0.35
NinQ61043 Gm12341-201ENSMUST00000119724 503 ntBASIC17.23■□□□□ 0.35
NinQ61043 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NinQ61043 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
NinQ61043 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
NinQ61043 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NinQ61043 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
NinQ61043 CT030657.3-201ENSMUST00000222707 1200 ntBASIC17.23■□□□□ 0.35
NinQ61043 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NinQ61043 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
NinQ61043 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NinQ61043 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NinQ61043 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
NinQ61043 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NinQ61043 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NinQ61043 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NinQ61043 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
NinQ61043 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NinQ61043 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
NinQ61043 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
NinQ61043 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
NinQ61043 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NinQ61043 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NinQ61043 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NinQ61043 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NinQ61043 Gm7067-201ENSMUST00000207698 1249 ntBASIC17.23■□□□□ 0.35
NinQ61043 AC155286.1-201ENSMUST00000218632 448 ntBASIC17.23■□□□□ 0.35
NinQ61043 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NinQ61043 AC155252.1-201ENSMUST00000226462 1208 ntBASIC17.23■□□□□ 0.35
NinQ61043 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NinQ61043 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NinQ61043 Gm5356-201ENSMUST00000093326 615 ntBASIC17.23■□□□□ 0.35
NinQ61043 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NinQ61043 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NinQ61043 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NinQ61043 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms