Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-3Q5R1E6 Gm27646-201ENSMUST00000183989 110 ntBASIC12.14□□□□□ -0.47
Trav6-3Q5R1E6 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav6-3Q5R1E6 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav6-3Q5R1E6 Gm13830-205ENSMUST00000201195 1155 ntBASIC12.14□□□□□ -0.47
Trav6-3Q5R1E6 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-3Q5R1E6 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-3Q5R1E6 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav6-3Q5R1E6 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-3Q5R1E6 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-3Q5R1E6 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Trav6-3Q5R1E6 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-3Q5R1E6 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-3Q5R1E6 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-3Q5R1E6 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.14□□□□□ -0.47
Trav6-3Q5R1E6 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-3Q5R1E6 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-3Q5R1E6 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-3Q5R1E6 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.14□□□□□ -0.47
Trav6-3Q5R1E6 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-3Q5R1E6 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trav6-3Q5R1E6 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-3Q5R1E6 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-3Q5R1E6 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Trav6-3Q5R1E6 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-3Q5R1E6 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-3Q5R1E6 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-3Q5R1E6 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-3Q5R1E6 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trav6-3Q5R1E6 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-3Q5R1E6 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-3Q5R1E6 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-3Q5R1E6 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trav6-3Q5R1E6 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Trav6-3Q5R1E6 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-3Q5R1E6 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Trav6-3Q5R1E6 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trav6-3Q5R1E6 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Trav6-3Q5R1E6 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-3Q5R1E6 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-3Q5R1E6 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-3Q5R1E6 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.13□□□□□ -0.47
Trav6-3Q5R1E6 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.13□□□□□ -0.47
Trav6-3Q5R1E6 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.13□□□□□ -0.47
Trav6-3Q5R1E6 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
Trav6-3Q5R1E6 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-3Q5R1E6 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-3Q5R1E6 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-3Q5R1E6 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Trav6-3Q5R1E6 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC12.13□□□□□ -0.47
Trav6-3Q5R1E6 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-3Q5R1E6 Gm6296-201ENSMUST00000222599 943 ntBASIC12.13□□□□□ -0.47
Trav6-3Q5R1E6 Mxra8os-201ENSMUST00000097740 687 ntBASIC12.13□□□□□ -0.47
Trav6-3Q5R1E6 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-3Q5R1E6 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-3Q5R1E6 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav6-3Q5R1E6 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trav6-3Q5R1E6 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-3Q5R1E6 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-3Q5R1E6 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-3Q5R1E6 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-3Q5R1E6 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-3Q5R1E6 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-3Q5R1E6 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-3Q5R1E6 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.13□□□□□ -0.47
Trav6-3Q5R1E6 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-3Q5R1E6 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-3Q5R1E6 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-3Q5R1E6 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-3Q5R1E6 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trav6-3Q5R1E6 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-3Q5R1E6 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-3Q5R1E6 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-3Q5R1E6 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trav6-3Q5R1E6 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-3Q5R1E6 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-3Q5R1E6 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.12□□□□□ -0.47
Trav6-3Q5R1E6 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Trav6-3Q5R1E6 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-3Q5R1E6 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trav6-3Q5R1E6 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.12□□□□□ -0.47
Trav6-3Q5R1E6 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-3Q5R1E6 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-3Q5R1E6 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-3Q5R1E6 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-3Q5R1E6 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-3Q5R1E6 Gm11453-201ENSMUST00000117318 1007 ntBASIC12.12□□□□□ -0.47
Trav6-3Q5R1E6 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-3Q5R1E6 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC12.12□□□□□ -0.47
Trav6-3Q5R1E6 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC12.12□□□□□ -0.47
Trav6-3Q5R1E6 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-3Q5R1E6 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trav6-3Q5R1E6 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.12□□□□□ -0.47
Trav6-3Q5R1E6 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-3Q5R1E6 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-3Q5R1E6 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-3Q5R1E6 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-3Q5R1E6 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-3Q5R1E6 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-3Q5R1E6 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms