Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col27a1Q5QNQ9 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col27a1Q5QNQ9 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col27a1Q5QNQ9 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Col27a1Q5QNQ9 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Col27a1Q5QNQ9 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col27a1Q5QNQ9 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col27a1Q5QNQ9 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC14.33□□□□□ -0.12
Col27a1Q5QNQ9 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC14.33□□□□□ -0.12
Col27a1Q5QNQ9 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC14.33□□□□□ -0.12
Col27a1Q5QNQ9 Gm17794-201ENSMUST00000220252 955 ntBASIC14.33□□□□□ -0.12
Col27a1Q5QNQ9 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.33□□□□□ -0.12
Col27a1Q5QNQ9 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col27a1Q5QNQ9 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col27a1Q5QNQ9 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Col27a1Q5QNQ9 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col27a1Q5QNQ9 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col27a1Q5QNQ9 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col27a1Q5QNQ9 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC14.33□□□□□ -0.12
Col27a1Q5QNQ9 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Col27a1Q5QNQ9 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col27a1Q5QNQ9 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Col27a1Q5QNQ9 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.32□□□□□ -0.12
Col27a1Q5QNQ9 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Col27a1Q5QNQ9 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col27a1Q5QNQ9 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col27a1Q5QNQ9 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col27a1Q5QNQ9 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col27a1Q5QNQ9 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Col27a1Q5QNQ9 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.32□□□□□ -0.12
Col27a1Q5QNQ9 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col27a1Q5QNQ9 Gm44974-201ENSMUST00000206387 1279 ntBASIC14.32□□□□□ -0.12
Col27a1Q5QNQ9 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col27a1Q5QNQ9 AC140451.2-201ENSMUST00000228030 664 ntBASIC14.32□□□□□ -0.12
Col27a1Q5QNQ9 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC14.32□□□□□ -0.12
Col27a1Q5QNQ9 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col27a1Q5QNQ9 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col27a1Q5QNQ9 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col27a1Q5QNQ9 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col27a1Q5QNQ9 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.32□□□□□ -0.12
Col27a1Q5QNQ9 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC14.31□□□□□ -0.12
Col27a1Q5QNQ9 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.31□□□□□ -0.12
Col27a1Q5QNQ9 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col27a1Q5QNQ9 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col27a1Q5QNQ9 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col27a1Q5QNQ9 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.31□□□□□ -0.12
Col27a1Q5QNQ9 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col27a1Q5QNQ9 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col27a1Q5QNQ9 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.31□□□□□ -0.12
Col27a1Q5QNQ9 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col27a1Q5QNQ9 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col27a1Q5QNQ9 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.31□□□□□ -0.12
Col27a1Q5QNQ9 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.31□□□□□ -0.12
Col27a1Q5QNQ9 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col27a1Q5QNQ9 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col27a1Q5QNQ9 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.31□□□□□ -0.12
Col27a1Q5QNQ9 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col27a1Q5QNQ9 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col27a1Q5QNQ9 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col27a1Q5QNQ9 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.31□□□□□ -0.12
Col27a1Q5QNQ9 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC14.31□□□□□ -0.12
Col27a1Q5QNQ9 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Col27a1Q5QNQ9 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col27a1Q5QNQ9 Gm24196-201ENSMUST00000179161 110 ntBASIC14.31□□□□□ -0.12
Col27a1Q5QNQ9 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Col27a1Q5QNQ9 Gm18054-201ENSMUST00000207539 555 ntBASIC14.31□□□□□ -0.12
Col27a1Q5QNQ9 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col27a1Q5QNQ9 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col27a1Q5QNQ9 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col27a1Q5QNQ9 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Col27a1Q5QNQ9 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col27a1Q5QNQ9 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.31□□□□□ -0.12
Col27a1Q5QNQ9 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col27a1Q5QNQ9 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col27a1Q5QNQ9 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC14.3□□□□□ -0.12
Col27a1Q5QNQ9 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col27a1Q5QNQ9 Gm26596-201ENSMUST00000180464 2655 ntBASIC14.3□□□□□ -0.12
Col27a1Q5QNQ9 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.3□□□□□ -0.12
Col27a1Q5QNQ9 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC14.3□□□□□ -0.12
Col27a1Q5QNQ9 Mir3547-201ENSMUST00000175461 88 ntBASIC14.3□□□□□ -0.12
Col27a1Q5QNQ9 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col27a1Q5QNQ9 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC14.3□□□□□ -0.12
Col27a1Q5QNQ9 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14.3□□□□□ -0.12
Col27a1Q5QNQ9 Gm17795-201ENSMUST00000214505 757 ntBASIC14.3□□□□□ -0.12
Col27a1Q5QNQ9 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col27a1Q5QNQ9 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col27a1Q5QNQ9 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Col27a1Q5QNQ9 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.3□□□□□ -0.12
Col27a1Q5QNQ9 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col27a1Q5QNQ9 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col27a1Q5QNQ9 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col27a1Q5QNQ9 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col27a1Q5QNQ9 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col27a1Q5QNQ9 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col27a1Q5QNQ9 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col27a1Q5QNQ9 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col27a1Q5QNQ9 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col27a1Q5QNQ9 Gm19439-201ENSMUST00000198195 2273 ntBASIC14.3□□□□□ -0.12
Col27a1Q5QNQ9 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col27a1Q5QNQ9 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms