Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps13aQ5H8C4 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vps13aQ5H8C4 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps13aQ5H8C4 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps13aQ5H8C4 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vps13aQ5H8C4 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vps13aQ5H8C4 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vps13aQ5H8C4 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vps13aQ5H8C4 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vps13aQ5H8C4 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vps13aQ5H8C4 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vps13aQ5H8C4 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Vps13aQ5H8C4 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Vps13aQ5H8C4 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC14.77□□□□□ -0.04
Vps13aQ5H8C4 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vps13aQ5H8C4 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vps13aQ5H8C4 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vps13aQ5H8C4 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vps13aQ5H8C4 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vps13aQ5H8C4 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
Vps13aQ5H8C4 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.77□□□□□ -0.04
Vps13aQ5H8C4 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vps13aQ5H8C4 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vps13aQ5H8C4 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vps13aQ5H8C4 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vps13aQ5H8C4 Gm16476-201ENSMUST00000221544 139 ntBASIC14.77□□□□□ -0.05
Vps13aQ5H8C4 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Vps13aQ5H8C4 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Vps13aQ5H8C4 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vps13aQ5H8C4 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vps13aQ5H8C4 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.77□□□□□ -0.05
Vps13aQ5H8C4 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.77□□□□□ -0.05
Vps13aQ5H8C4 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vps13aQ5H8C4 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vps13aQ5H8C4 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.77□□□□□ -0.05
Vps13aQ5H8C4 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vps13aQ5H8C4 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vps13aQ5H8C4 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vps13aQ5H8C4 Mir692-1-201ENSMUST00000102263 109 ntBASIC14.77□□□□□ -0.05
Vps13aQ5H8C4 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Vps13aQ5H8C4 Mir7070-201ENSMUST00000183657 86 ntBASIC14.77□□□□□ -0.05
Vps13aQ5H8C4 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC14.77□□□□□ -0.05
Vps13aQ5H8C4 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.77□□□□□ -0.05
Vps13aQ5H8C4 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
Vps13aQ5H8C4 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps13aQ5H8C4 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps13aQ5H8C4 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps13aQ5H8C4 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Vps13aQ5H8C4 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Vps13aQ5H8C4 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC14.76□□□□□ -0.05
Vps13aQ5H8C4 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Vps13aQ5H8C4 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Vps13aQ5H8C4 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC14.76□□□□□ -0.05
Vps13aQ5H8C4 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC14.76□□□□□ -0.05
Vps13aQ5H8C4 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.76□□□□□ -0.05
Vps13aQ5H8C4 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Vps13aQ5H8C4 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Vps13aQ5H8C4 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps13aQ5H8C4 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps13aQ5H8C4 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps13aQ5H8C4 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps13aQ5H8C4 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC14.76□□□□□ -0.05
Vps13aQ5H8C4 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.76□□□□□ -0.05
Vps13aQ5H8C4 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.76□□□□□ -0.05
Vps13aQ5H8C4 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC14.76□□□□□ -0.05
Vps13aQ5H8C4 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.76□□□□□ -0.05
Vps13aQ5H8C4 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Vps13aQ5H8C4 Gm2495-201ENSMUST00000191160 466 ntBASIC14.76□□□□□ -0.05
Vps13aQ5H8C4 Gm46209-201ENSMUST00000217912 553 ntBASIC14.76□□□□□ -0.05
Vps13aQ5H8C4 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14.76□□□□□ -0.05
Vps13aQ5H8C4 AC140451.2-201ENSMUST00000228030 664 ntBASIC14.76□□□□□ -0.05
Vps13aQ5H8C4 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps13aQ5H8C4 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.76□□□□□ -0.05
Vps13aQ5H8C4 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Vps13aQ5H8C4 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Vps13aQ5H8C4 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps13aQ5H8C4 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Vps13aQ5H8C4 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps13aQ5H8C4 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
Vps13aQ5H8C4 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps13aQ5H8C4 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC14.75□□□□□ -0.05
Vps13aQ5H8C4 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps13aQ5H8C4 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Vps13aQ5H8C4 Gm37466-201ENSMUST00000195692 652 ntBASIC14.75□□□□□ -0.05
Vps13aQ5H8C4 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.75□□□□□ -0.05
Vps13aQ5H8C4 AC110817.1-201ENSMUST00000225706 605 ntBASIC14.75□□□□□ -0.05
Vps13aQ5H8C4 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps13aQ5H8C4 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC14.75□□□□□ -0.05
Vps13aQ5H8C4 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps13aQ5H8C4 Dancr-204ENSMUST00000132389 2347 ntBASIC14.75□□□□□ -0.05
Vps13aQ5H8C4 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps13aQ5H8C4 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps13aQ5H8C4 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps13aQ5H8C4 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Vps13aQ5H8C4 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps13aQ5H8C4 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps13aQ5H8C4 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Vps13aQ5H8C4 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps13aQ5H8C4 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Vps13aQ5H8C4 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms