Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cdkl5Q3UTQ8 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Cdkl5Q3UTQ8 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cdkl5Q3UTQ8 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC17.51■□□□□ 0.39
Cdkl5Q3UTQ8 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cdkl5Q3UTQ8 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdkl5Q3UTQ8 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Cdkl5Q3UTQ8 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cdkl5Q3UTQ8 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cdkl5Q3UTQ8 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cdkl5Q3UTQ8 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cdkl5Q3UTQ8 Mir5126-201ENSMUST00000175513 77 ntBASIC17.51■□□□□ 0.39
Cdkl5Q3UTQ8 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC17.51■□□□□ 0.39
Cdkl5Q3UTQ8 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cdkl5Q3UTQ8 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdkl5Q3UTQ8 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Cdkl5Q3UTQ8 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdkl5Q3UTQ8 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cdkl5Q3UTQ8 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdkl5Q3UTQ8 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdkl5Q3UTQ8 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
Cdkl5Q3UTQ8 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Cdkl5Q3UTQ8 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdkl5Q3UTQ8 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdkl5Q3UTQ8 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdkl5Q3UTQ8 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdkl5Q3UTQ8 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdkl5Q3UTQ8 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdkl5Q3UTQ8 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdkl5Q3UTQ8 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Cdkl5Q3UTQ8 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Cdkl5Q3UTQ8 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdkl5Q3UTQ8 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cdkl5Q3UTQ8 Gm4899-201ENSMUST00000178708 719 ntBASIC17.5■□□□□ 0.39
Cdkl5Q3UTQ8 Gm42670-201ENSMUST00000201816 1292 ntBASIC17.5■□□□□ 0.39
Cdkl5Q3UTQ8 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC17.5■□□□□ 0.39
Cdkl5Q3UTQ8 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdkl5Q3UTQ8 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdkl5Q3UTQ8 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Cdkl5Q3UTQ8 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
Cdkl5Q3UTQ8 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cdkl5Q3UTQ8 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdkl5Q3UTQ8 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdkl5Q3UTQ8 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdkl5Q3UTQ8 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Cdkl5Q3UTQ8 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdkl5Q3UTQ8 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cdkl5Q3UTQ8 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdkl5Q3UTQ8 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Cdkl5Q3UTQ8 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdkl5Q3UTQ8 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cdkl5Q3UTQ8 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdkl5Q3UTQ8 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdkl5Q3UTQ8 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cdkl5Q3UTQ8 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdkl5Q3UTQ8 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdkl5Q3UTQ8 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdkl5Q3UTQ8 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdkl5Q3UTQ8 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdkl5Q3UTQ8 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Cdkl5Q3UTQ8 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cdkl5Q3UTQ8 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdkl5Q3UTQ8 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdkl5Q3UTQ8 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cdkl5Q3UTQ8 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC17.49■□□□□ 0.39
Cdkl5Q3UTQ8 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.49■□□□□ 0.39
Cdkl5Q3UTQ8 Gm43767-201ENSMUST00000198933 381 ntBASIC17.49■□□□□ 0.39
Cdkl5Q3UTQ8 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cdkl5Q3UTQ8 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdkl5Q3UTQ8 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdkl5Q3UTQ8 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdkl5Q3UTQ8 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdkl5Q3UTQ8 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdkl5Q3UTQ8 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cdkl5Q3UTQ8 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cdkl5Q3UTQ8 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Cdkl5Q3UTQ8 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdkl5Q3UTQ8 AC174678.1-201ENSMUST00000228007 2749 ntBASIC17.49■□□□□ 0.39
Cdkl5Q3UTQ8 Gm29361-201ENSMUST00000183323 2000 ntBASIC17.48■□□□□ 0.39
Cdkl5Q3UTQ8 Gm5366-201ENSMUST00000215494 1338 ntBASIC17.48■□□□□ 0.39
Cdkl5Q3UTQ8 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdkl5Q3UTQ8 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cdkl5Q3UTQ8 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Cdkl5Q3UTQ8 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdkl5Q3UTQ8 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cdkl5Q3UTQ8 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC17.48■□□□□ 0.39
Cdkl5Q3UTQ8 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cdkl5Q3UTQ8 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cdkl5Q3UTQ8 Gm27741-201ENSMUST00000185060 237 ntBASIC17.48■□□□□ 0.39
Cdkl5Q3UTQ8 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC17.48■□□□□ 0.39
Cdkl5Q3UTQ8 Gm15590-201ENSMUST00000078419 552 ntBASIC17.48■□□□□ 0.39
Cdkl5Q3UTQ8 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdkl5Q3UTQ8 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdkl5Q3UTQ8 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdkl5Q3UTQ8 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdkl5Q3UTQ8 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdkl5Q3UTQ8 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdkl5Q3UTQ8 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdkl5Q3UTQ8 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdkl5Q3UTQ8 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms