Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Gm12957-201ENSMUST00000117835 377 ntBASIC19.4■□□□□ 0.7
Sf3b2Q3UJB0 Gm21854-201ENSMUST00000179901 471 ntBASIC19.4■□□□□ 0.7
Sf3b2Q3UJB0 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Sf3b2Q3UJB0 Gm7556-201ENSMUST00000201178 1084 ntBASIC19.4■□□□□ 0.7
Sf3b2Q3UJB0 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sf3b2Q3UJB0 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sf3b2Q3UJB0 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC19.4■□□□□ 0.7
Sf3b2Q3UJB0 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sf3b2Q3UJB0 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sf3b2Q3UJB0 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sf3b2Q3UJB0 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sf3b2Q3UJB0 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sf3b2Q3UJB0 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sf3b2Q3UJB0 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sf3b2Q3UJB0 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sf3b2Q3UJB0 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sf3b2Q3UJB0 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Sf3b2Q3UJB0 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Sf3b2Q3UJB0 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sf3b2Q3UJB0 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sf3b2Q3UJB0 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Sf3b2Q3UJB0 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sf3b2Q3UJB0 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Sf3b2Q3UJB0 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC19.39■□□□□ 0.69
Sf3b2Q3UJB0 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC19.39■□□□□ 0.69
Sf3b2Q3UJB0 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC19.39■□□□□ 0.69
Sf3b2Q3UJB0 AC165157.4-201ENSMUST00000220587 139 ntBASIC19.39■□□□□ 0.69
Sf3b2Q3UJB0 CT030657.3-201ENSMUST00000222707 1200 ntBASIC19.39■□□□□ 0.69
Sf3b2Q3UJB0 CT009510.1-201ENSMUST00000227972 270 ntBASIC19.39■□□□□ 0.69
Sf3b2Q3UJB0 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Sf3b2Q3UJB0 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sf3b2Q3UJB0 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Sf3b2Q3UJB0 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sf3b2Q3UJB0 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Sf3b2Q3UJB0 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.39■□□□□ 0.69
Sf3b2Q3UJB0 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sf3b2Q3UJB0 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sf3b2Q3UJB0 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sf3b2Q3UJB0 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
Sf3b2Q3UJB0 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Sf3b2Q3UJB0 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sf3b2Q3UJB0 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC19.38■□□□□ 0.69
Sf3b2Q3UJB0 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Sf3b2Q3UJB0 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Sf3b2Q3UJB0 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC19.38■□□□□ 0.69
Sf3b2Q3UJB0 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC19.38■□□□□ 0.69
Sf3b2Q3UJB0 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC19.38■□□□□ 0.69
Sf3b2Q3UJB0 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sf3b2Q3UJB0 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Sf3b2Q3UJB0 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC19.38■□□□□ 0.69
Sf3b2Q3UJB0 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Sf3b2Q3UJB0 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC19.38■□□□□ 0.69
Sf3b2Q3UJB0 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Sf3b2Q3UJB0 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sf3b2Q3UJB0 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC19.38■□□□□ 0.69
Sf3b2Q3UJB0 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC19.38■□□□□ 0.69
Sf3b2Q3UJB0 AC114008.2-201ENSMUST00000227699 1347 ntBASIC19.38■□□□□ 0.69
Sf3b2Q3UJB0 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Sf3b2Q3UJB0 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sf3b2Q3UJB0 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Sf3b2Q3UJB0 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sf3b2Q3UJB0 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sf3b2Q3UJB0 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Sf3b2Q3UJB0 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Sf3b2Q3UJB0 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sf3b2Q3UJB0 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sf3b2Q3UJB0 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sf3b2Q3UJB0 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sf3b2Q3UJB0 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC19.37■□□□□ 0.69
Sf3b2Q3UJB0 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Sf3b2Q3UJB0 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
Sf3b2Q3UJB0 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Sf3b2Q3UJB0 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Sf3b2Q3UJB0 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC19.37■□□□□ 0.69
Sf3b2Q3UJB0 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC19.37■□□□□ 0.69
Sf3b2Q3UJB0 Gm5479-201ENSMUST00000160578 435 ntBASIC19.37■□□□□ 0.69
Sf3b2Q3UJB0 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC19.37■□□□□ 0.69
Sf3b2Q3UJB0 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC19.37■□□□□ 0.69
Sf3b2Q3UJB0 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sf3b2Q3UJB0 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC19.37■□□□□ 0.69
Sf3b2Q3UJB0 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC19.37■□□□□ 0.69
Sf3b2Q3UJB0 Gm19220-201ENSMUST00000222682 803 ntBASIC19.37■□□□□ 0.69
Sf3b2Q3UJB0 AC069562.2-201ENSMUST00000224644 2146 ntBASIC19.37■□□□□ 0.69
Sf3b2Q3UJB0 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sf3b2Q3UJB0 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sf3b2Q3UJB0 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sf3b2Q3UJB0 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sf3b2Q3UJB0 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC19.36■□□□□ 0.69
Sf3b2Q3UJB0 Gm43338-201ENSMUST00000198617 2223 ntBASIC19.36■□□□□ 0.69
Sf3b2Q3UJB0 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sf3b2Q3UJB0 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Sf3b2Q3UJB0 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sf3b2Q3UJB0 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sf3b2Q3UJB0 Gm6222-201ENSMUST00000120787 396 ntBASIC19.36■□□□□ 0.69
Sf3b2Q3UJB0 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Sf3b2Q3UJB0 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC19.36■□□□□ 0.69
Sf3b2Q3UJB0 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Sf3b2Q3UJB0 AC164567.1-201ENSMUST00000219185 960 ntBASIC19.36■□□□□ 0.69
Sf3b2Q3UJB0 Gm9229-201ENSMUST00000222777 126 ntBASIC19.36■□□□□ 0.69
Sf3b2Q3UJB0 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms