Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Brf2Q3UAW9 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Brf2Q3UAW9 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Brf2Q3UAW9 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Brf2Q3UAW9 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Brf2Q3UAW9 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.25□□□□□ -0.13
Brf2Q3UAW9 Gm7153-201ENSMUST00000117092 455 ntBASIC14.25□□□□□ -0.13
Brf2Q3UAW9 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Brf2Q3UAW9 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Brf2Q3UAW9 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.25□□□□□ -0.13
Brf2Q3UAW9 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.25□□□□□ -0.13
Brf2Q3UAW9 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Brf2Q3UAW9 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.25□□□□□ -0.13
Brf2Q3UAW9 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Brf2Q3UAW9 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Brf2Q3UAW9 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Brf2Q3UAW9 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Brf2Q3UAW9 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Brf2Q3UAW9 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Brf2Q3UAW9 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Brf2Q3UAW9 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Brf2Q3UAW9 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.25□□□□□ -0.13
Brf2Q3UAW9 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Brf2Q3UAW9 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Brf2Q3UAW9 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Brf2Q3UAW9 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.25□□□□□ -0.13
Brf2Q3UAW9 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Brf2Q3UAW9 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.25□□□□□ -0.13
Brf2Q3UAW9 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Brf2Q3UAW9 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Brf2Q3UAW9 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Brf2Q3UAW9 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Brf2Q3UAW9 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Brf2Q3UAW9 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Brf2Q3UAW9 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Brf2Q3UAW9 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Brf2Q3UAW9 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Brf2Q3UAW9 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Brf2Q3UAW9 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Brf2Q3UAW9 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC14.24□□□□□ -0.13
Brf2Q3UAW9 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Brf2Q3UAW9 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.24□□□□□ -0.13
Brf2Q3UAW9 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.24□□□□□ -0.13
Brf2Q3UAW9 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.24□□□□□ -0.13
Brf2Q3UAW9 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Brf2Q3UAW9 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Brf2Q3UAW9 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Brf2Q3UAW9 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Brf2Q3UAW9 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Brf2Q3UAW9 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Brf2Q3UAW9 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Brf2Q3UAW9 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC14.24□□□□□ -0.13
Brf2Q3UAW9 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Brf2Q3UAW9 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Brf2Q3UAW9 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Brf2Q3UAW9 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Brf2Q3UAW9 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Brf2Q3UAW9 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Brf2Q3UAW9 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Brf2Q3UAW9 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Brf2Q3UAW9 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.23□□□□□ -0.13
Brf2Q3UAW9 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Brf2Q3UAW9 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.23□□□□□ -0.13
Brf2Q3UAW9 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Brf2Q3UAW9 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Brf2Q3UAW9 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.23□□□□□ -0.13
Brf2Q3UAW9 Gm15173-201ENSMUST00000122049 433 ntBASIC14.23□□□□□ -0.13
Brf2Q3UAW9 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Brf2Q3UAW9 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Brf2Q3UAW9 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Brf2Q3UAW9 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Brf2Q3UAW9 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Brf2Q3UAW9 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Brf2Q3UAW9 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.23□□□□□ -0.13
Brf2Q3UAW9 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Brf2Q3UAW9 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Brf2Q3UAW9 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Brf2Q3UAW9 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Brf2Q3UAW9 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Brf2Q3UAW9 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Brf2Q3UAW9 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Brf2Q3UAW9 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Brf2Q3UAW9 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Brf2Q3UAW9 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Brf2Q3UAW9 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Brf2Q3UAW9 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Brf2Q3UAW9 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Brf2Q3UAW9 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Brf2Q3UAW9 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Brf2Q3UAW9 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Brf2Q3UAW9 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Brf2Q3UAW9 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Brf2Q3UAW9 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Brf2Q3UAW9 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Brf2Q3UAW9 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.22□□□□□ -0.13
Brf2Q3UAW9 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Brf2Q3UAW9 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Brf2Q3UAW9 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Brf2Q3UAW9 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Brf2Q3UAW9 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms