Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Hspg2Q05793 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hspg2Q05793 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hspg2Q05793 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hspg2Q05793 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hspg2Q05793 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hspg2Q05793 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Hspg2Q05793 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hspg2Q05793 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hspg2Q05793 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC10.99□□□□□ -0.65
Hspg2Q05793 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hspg2Q05793 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hspg2Q05793 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Hspg2Q05793 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Hspg2Q05793 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Hspg2Q05793 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC10.98□□□□□ -0.65
Hspg2Q05793 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC10.98□□□□□ -0.65
Hspg2Q05793 AC160980.1-201ENSMUST00000224136 970 ntBASIC10.98□□□□□ -0.65
Hspg2Q05793 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hspg2Q05793 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Hspg2Q05793 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hspg2Q05793 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hspg2Q05793 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hspg2Q05793 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hspg2Q05793 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hspg2Q05793 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC10.98□□□□□ -0.65
Hspg2Q05793 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC10.98□□□□□ -0.65
Hspg2Q05793 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hspg2Q05793 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Hspg2Q05793 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hspg2Q05793 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Hspg2Q05793 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC10.98□□□□□ -0.65
Hspg2Q05793 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC10.98□□□□□ -0.65
Hspg2Q05793 AC090659.2-201ENSMUST00000225378 1186 ntBASIC10.98□□□□□ -0.65
Hspg2Q05793 AC155252.1-201ENSMUST00000226462 1208 ntBASIC10.98□□□□□ -0.65
Hspg2Q05793 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hspg2Q05793 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC10.98□□□□□ -0.65
Hspg2Q05793 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hspg2Q05793 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Hspg2Q05793 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Hspg2Q05793 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hspg2Q05793 Gm13392-201ENSMUST00000117708 150 ntBASIC10.97□□□□□ -0.65
Hspg2Q05793 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Hspg2Q05793 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Hspg2Q05793 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Hspg2Q05793 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC10.97□□□□□ -0.65
Hspg2Q05793 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Hspg2Q05793 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hspg2Q05793 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC10.97□□□□□ -0.65
Hspg2Q05793 Gm19439-201ENSMUST00000198195 2273 ntBASIC10.97□□□□□ -0.65
Hspg2Q05793 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hspg2Q05793 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hspg2Q05793 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hspg2Q05793 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC10.97□□□□□ -0.65
Hspg2Q05793 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Hspg2Q05793 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC10.97□□□□□ -0.65
Hspg2Q05793 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hspg2Q05793 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hspg2Q05793 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hspg2Q05793 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC10.97□□□□□ -0.65
Hspg2Q05793 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Hspg2Q05793 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Hspg2Q05793 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Hspg2Q05793 Gm19430-201ENSMUST00000193847 2137 ntBASIC10.97□□□□□ -0.65
Hspg2Q05793 AC174678.1-201ENSMUST00000228007 2749 ntBASIC10.97□□□□□ -0.65
Hspg2Q05793 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hspg2Q05793 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Hspg2Q05793 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hspg2Q05793 Ldha-ps-201ENSMUST00000119390 995 ntBASIC10.97□□□□□ -0.65
Hspg2Q05793 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC10.97□□□□□ -0.65
Hspg2Q05793 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC10.97□□□□□ -0.65
Hspg2Q05793 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Hspg2Q05793 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC10.97□□□□□ -0.65
Hspg2Q05793 Gm29310-201ENSMUST00000185468 696 ntBASIC10.97□□□□□ -0.65
Hspg2Q05793 Gm21825-201ENSMUST00000185728 696 ntBASIC10.97□□□□□ -0.65
Hspg2Q05793 Gm29109-201ENSMUST00000185895 696 ntBASIC10.97□□□□□ -0.65
Hspg2Q05793 Gm21896-201ENSMUST00000186520 696 ntBASIC10.97□□□□□ -0.65
Hspg2Q05793 Gm21873-201ENSMUST00000186728 696 ntBASIC10.97□□□□□ -0.65
Hspg2Q05793 Gm21794-201ENSMUST00000187056 696 ntBASIC10.97□□□□□ -0.65
Hspg2Q05793 Gm21880-201ENSMUST00000187275 696 ntBASIC10.97□□□□□ -0.65
Hspg2Q05793 Gm21826-201ENSMUST00000187451 696 ntBASIC10.97□□□□□ -0.65
Hspg2Q05793 Gm21198-201ENSMUST00000188393 696 ntBASIC10.97□□□□□ -0.65
Hspg2Q05793 Gm21749-201ENSMUST00000189343 696 ntBASIC10.97□□□□□ -0.65
Hspg2Q05793 Gm21901-201ENSMUST00000189568 696 ntBASIC10.97□□□□□ -0.65
Hspg2Q05793 Gm29424-201ENSMUST00000189716 696 ntBASIC10.97□□□□□ -0.65
Hspg2Q05793 Gm28599-201ENSMUST00000189838 694 ntBASIC10.97□□□□□ -0.65
Hspg2Q05793 Gm21867-201ENSMUST00000189917 696 ntBASIC10.97□□□□□ -0.65
Hspg2Q05793 Gm29269-201ENSMUST00000190087 696 ntBASIC10.97□□□□□ -0.65
Hspg2Q05793 Gm21722-201ENSMUST00000190153 696 ntBASIC10.97□□□□□ -0.65
Hspg2Q05793 Gm28423-201ENSMUST00000190701 696 ntBASIC10.97□□□□□ -0.65
Hspg2Q05793 Gm21899-201ENSMUST00000190745 696 ntBASIC10.97□□□□□ -0.65
Hspg2Q05793 Gm21910-201ENSMUST00000191163 696 ntBASIC10.97□□□□□ -0.65
Hspg2Q05793 Gm8597-201ENSMUST00000191525 1109 ntBASIC10.97□□□□□ -0.65
Hspg2Q05793 Gm21849-201ENSMUST00000191571 696 ntBASIC10.97□□□□□ -0.65
Hspg2Q05793 Gm28678-201ENSMUST00000191593 696 ntBASIC10.97□□□□□ -0.65
Hspg2Q05793 Gm20910-201ENSMUST00000193268 696 ntBASIC10.97□□□□□ -0.65
Hspg2Q05793 Gm21871-201ENSMUST00000194621 696 ntBASIC10.97□□□□□ -0.65
Hspg2Q05793 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Hspg2Q05793 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hspg2Q05793 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms