Protein–RNA interactions for Protein: Q04683

Cxcr5, C-X-C chemokine receptor type 5, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr5Q04683 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Cxcr5Q04683 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cxcr5Q04683 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cxcr5Q04683 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cxcr5Q04683 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
Cxcr5Q04683 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14.4□□□□□ -0.1
Cxcr5Q04683 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.4□□□□□ -0.1
Cxcr5Q04683 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cxcr5Q04683 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Cxcr5Q04683 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cxcr5Q04683 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cxcr5Q04683 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cxcr5Q04683 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cxcr5Q04683 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.4□□□□□ -0.1
Cxcr5Q04683 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Cxcr5Q04683 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cxcr5Q04683 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.4□□□□□ -0.1
Cxcr5Q04683 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cxcr5Q04683 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cxcr5Q04683 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cxcr5Q04683 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cxcr5Q04683 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cxcr5Q04683 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cxcr5Q04683 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cxcr5Q04683 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cxcr5Q04683 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cxcr5Q04683 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cxcr5Q04683 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cxcr5Q04683 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cxcr5Q04683 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Cxcr5Q04683 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Cxcr5Q04683 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cxcr5Q04683 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Cxcr5Q04683 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.39□□□□□ -0.11
Cxcr5Q04683 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cxcr5Q04683 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.39□□□□□ -0.11
Cxcr5Q04683 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Cxcr5Q04683 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.39□□□□□ -0.11
Cxcr5Q04683 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cxcr5Q04683 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cxcr5Q04683 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cxcr5Q04683 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cxcr5Q04683 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cxcr5Q04683 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cxcr5Q04683 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cxcr5Q04683 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cxcr5Q04683 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cxcr5Q04683 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cxcr5Q04683 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Cxcr5Q04683 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Cxcr5Q04683 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.39□□□□□ -0.11
Cxcr5Q04683 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cxcr5Q04683 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cxcr5Q04683 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cxcr5Q04683 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.38□□□□□ -0.11
Cxcr5Q04683 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cxcr5Q04683 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.38□□□□□ -0.11
Cxcr5Q04683 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cxcr5Q04683 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cxcr5Q04683 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cxcr5Q04683 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cxcr5Q04683 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.38□□□□□ -0.11
Cxcr5Q04683 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.38□□□□□ -0.11
Cxcr5Q04683 Gm27704-201ENSMUST00000185094 107 ntBASIC14.38□□□□□ -0.11
Cxcr5Q04683 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Cxcr5Q04683 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cxcr5Q04683 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cxcr5Q04683 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cxcr5Q04683 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Cxcr5Q04683 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cxcr5Q04683 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cxcr5Q04683 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.38□□□□□ -0.11
Cxcr5Q04683 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cxcr5Q04683 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cxcr5Q04683 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Cxcr5Q04683 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Cxcr5Q04683 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cxcr5Q04683 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.38□□□□□ -0.11
Cxcr5Q04683 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cxcr5Q04683 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cxcr5Q04683 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Cxcr5Q04683 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cxcr5Q04683 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cxcr5Q04683 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cxcr5Q04683 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.37□□□□□ -0.11
Cxcr5Q04683 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.37□□□□□ -0.11
Cxcr5Q04683 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cxcr5Q04683 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Cxcr5Q04683 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Cxcr5Q04683 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cxcr5Q04683 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.37□□□□□ -0.11
Cxcr5Q04683 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cxcr5Q04683 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cxcr5Q04683 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cxcr5Q04683 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cxcr5Q04683 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.37□□□□□ -0.11
Cxcr5Q04683 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cxcr5Q04683 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cxcr5Q04683 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.37□□□□□ -0.11
Cxcr5Q04683 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms