Protein–RNA interactions for Protein: Q02789

Cacna1s, Voltage-dependent L-type calcium channel subunit alpha-1S, mousemouse

Predictions only

Length 1,880 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1sQ02789 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cacna1sQ02789 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Cacna1sQ02789 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cacna1sQ02789 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cacna1sQ02789 Gm7172-201ENSMUST00000218047 1152 ntBASIC18.8■□□□□ 0.6
Cacna1sQ02789 AC125117.1-201ENSMUST00000228121 468 ntBASIC18.8■□□□□ 0.6
Cacna1sQ02789 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC18.8■□□□□ 0.6
Cacna1sQ02789 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cacna1sQ02789 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cacna1sQ02789 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC18.8■□□□□ 0.6
Cacna1sQ02789 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cacna1sQ02789 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cacna1sQ02789 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cacna1sQ02789 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC18.8■□□□□ 0.6
Cacna1sQ02789 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cacna1sQ02789 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cacna1sQ02789 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC18.8■□□□□ 0.6
Cacna1sQ02789 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cacna1sQ02789 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Cacna1sQ02789 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cacna1sQ02789 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
Cacna1sQ02789 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC18.8■□□□□ 0.6
Cacna1sQ02789 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cacna1sQ02789 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC18.79■□□□□ 0.6
Cacna1sQ02789 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cacna1sQ02789 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cacna1sQ02789 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cacna1sQ02789 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cacna1sQ02789 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cacna1sQ02789 Gm4959-201ENSMUST00000197271 1044 ntBASIC18.79■□□□□ 0.6
Cacna1sQ02789 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cacna1sQ02789 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cacna1sQ02789 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cacna1sQ02789 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Cacna1sQ02789 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cacna1sQ02789 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cacna1sQ02789 AC166574.6-201ENSMUST00000227889 1806 ntBASIC18.78■□□□□ 0.6
Cacna1sQ02789 Gm24196-201ENSMUST00000179161 110 ntBASIC18.78■□□□□ 0.6
Cacna1sQ02789 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
Cacna1sQ02789 Gm10313-201ENSMUST00000095320 1002 ntBASIC18.78■□□□□ 0.6
Cacna1sQ02789 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacna1sQ02789 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacna1sQ02789 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacna1sQ02789 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacna1sQ02789 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacna1sQ02789 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cacna1sQ02789 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacna1sQ02789 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cacna1sQ02789 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacna1sQ02789 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacna1sQ02789 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cacna1sQ02789 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacna1sQ02789 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacna1sQ02789 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacna1sQ02789 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cacna1sQ02789 Gm14723-201ENSMUST00000118686 215 ntBASIC18.77■□□□□ 0.6
Cacna1sQ02789 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cacna1sQ02789 Gm8775-201ENSMUST00000170943 1327 ntBASIC18.77■□□□□ 0.6
Cacna1sQ02789 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cacna1sQ02789 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC18.77■□□□□ 0.6
Cacna1sQ02789 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cacna1sQ02789 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cacna1sQ02789 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC18.77■□□□□ 0.6
Cacna1sQ02789 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cacna1sQ02789 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cacna1sQ02789 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cacna1sQ02789 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC18.77■□□□□ 0.6
Cacna1sQ02789 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC18.77■□□□□ 0.6
Cacna1sQ02789 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cacna1sQ02789 Gm44974-201ENSMUST00000206387 1279 ntBASIC18.77■□□□□ 0.6
Cacna1sQ02789 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC18.77■□□□□ 0.6
Cacna1sQ02789 AC140451.2-201ENSMUST00000228030 664 ntBASIC18.77■□□□□ 0.6
Cacna1sQ02789 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cacna1sQ02789 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cacna1sQ02789 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC18.77■□□□□ 0.59
Cacna1sQ02789 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cacna1sQ02789 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cacna1sQ02789 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cacna1sQ02789 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Cacna1sQ02789 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cacna1sQ02789 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC18.76■□□□□ 0.59
Cacna1sQ02789 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC18.76■□□□□ 0.59
Cacna1sQ02789 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Cacna1sQ02789 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Cacna1sQ02789 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC18.76■□□□□ 0.59
Cacna1sQ02789 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cacna1sQ02789 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cacna1sQ02789 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cacna1sQ02789 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cacna1sQ02789 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cacna1sQ02789 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cacna1sQ02789 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cacna1sQ02789 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cacna1sQ02789 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cacna1sQ02789 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC18.75■□□□□ 0.59
Cacna1sQ02789 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC18.75■□□□□ 0.59
Cacna1sQ02789 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cacna1sQ02789 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cacna1sQ02789 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cacna1sQ02789 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms