Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Gm5712-201ENSMUST00000199748 1043 ntBASIC13.47□□□□□ -0.25
SgcbP82349 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.47□□□□□ -0.25
SgcbP82349 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC13.47□□□□□ -0.25
SgcbP82349 Gm45683-201ENSMUST00000210825 1247 ntBASIC13.47□□□□□ -0.25
SgcbP82349 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
SgcbP82349 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC13.47□□□□□ -0.25
SgcbP82349 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SgcbP82349 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SgcbP82349 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SgcbP82349 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SgcbP82349 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SgcbP82349 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
SgcbP82349 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SgcbP82349 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SgcbP82349 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SgcbP82349 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SgcbP82349 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
SgcbP82349 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
SgcbP82349 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SgcbP82349 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SgcbP82349 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
SgcbP82349 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
SgcbP82349 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
SgcbP82349 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
SgcbP82349 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SgcbP82349 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
SgcbP82349 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SgcbP82349 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
SgcbP82349 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SgcbP82349 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SgcbP82349 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
SgcbP82349 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SgcbP82349 Gm27528-202ENSMUST00000222916 2012 ntBASIC13.46□□□□□ -0.25
SgcbP82349 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SgcbP82349 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
SgcbP82349 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SgcbP82349 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.46□□□□□ -0.25
SgcbP82349 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
SgcbP82349 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC13.46□□□□□ -0.25
SgcbP82349 Gm2213-201ENSMUST00000197485 688 ntBASIC13.46□□□□□ -0.25
SgcbP82349 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SgcbP82349 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SgcbP82349 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SgcbP82349 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
SgcbP82349 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
SgcbP82349 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
SgcbP82349 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
SgcbP82349 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
SgcbP82349 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
SgcbP82349 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
SgcbP82349 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
SgcbP82349 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SgcbP82349 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
SgcbP82349 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SgcbP82349 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SgcbP82349 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SgcbP82349 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC13.45□□□□□ -0.26
SgcbP82349 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC13.45□□□□□ -0.26
SgcbP82349 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
SgcbP82349 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
SgcbP82349 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SgcbP82349 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SgcbP82349 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SgcbP82349 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SgcbP82349 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SgcbP82349 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SgcbP82349 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SgcbP82349 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC13.45□□□□□ -0.26
SgcbP82349 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.45□□□□□ -0.26
SgcbP82349 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SgcbP82349 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SgcbP82349 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SgcbP82349 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
SgcbP82349 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SgcbP82349 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SgcbP82349 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SgcbP82349 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SgcbP82349 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
SgcbP82349 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SgcbP82349 Gm42901-201ENSMUST00000197735 3171 ntBASIC13.45□□□□□ -0.26
SgcbP82349 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SgcbP82349 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SgcbP82349 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SgcbP82349 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SgcbP82349 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
SgcbP82349 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC13.45□□□□□ -0.26
SgcbP82349 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SgcbP82349 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SgcbP82349 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SgcbP82349 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SgcbP82349 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
SgcbP82349 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SgcbP82349 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SgcbP82349 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SgcbP82349 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
SgcbP82349 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SgcbP82349 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.44□□□□□ -0.26
SgcbP82349 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SgcbP82349 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SgcbP82349 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms