Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Gm27628-201ENSMUST00000184911 107 ntBASIC14.15□□□□□ -0.14
Six5P70178 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.15□□□□□ -0.14
Six5P70178 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Six5P70178 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Six5P70178 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Six5P70178 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.15□□□□□ -0.14
Six5P70178 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Six5P70178 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Six5P70178 BC037039-201ENSMUST00000192003 2205 ntBASIC14.15□□□□□ -0.14
Six5P70178 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.15□□□□□ -0.14
Six5P70178 Celf4-206ENSMUST00000224553 1729 ntBASIC14.15□□□□□ -0.14
Six5P70178 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Six5P70178 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Six5P70178 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Six5P70178 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Six5P70178 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Six5P70178 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.15□□□□□ -0.15
Six5P70178 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.15
Six5P70178 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Six5P70178 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Six5P70178 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Six5P70178 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Six5P70178 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Six5P70178 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Six5P70178 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Six5P70178 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Six5P70178 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Six5P70178 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Six5P70178 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Six5P70178 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Six5P70178 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Six5P70178 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Six5P70178 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Six5P70178 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Six5P70178 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Six5P70178 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Six5P70178 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.14□□□□□ -0.15
Six5P70178 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Six5P70178 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.14□□□□□ -0.15
Six5P70178 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Six5P70178 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.14□□□□□ -0.15
Six5P70178 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Six5P70178 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Six5P70178 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Six5P70178 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.14□□□□□ -0.15
Six5P70178 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Six5P70178 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Six5P70178 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Six5P70178 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Six5P70178 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.14□□□□□ -0.15
Six5P70178 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Six5P70178 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Six5P70178 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Six5P70178 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Six5P70178 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Six5P70178 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Six5P70178 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Six5P70178 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Six5P70178 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six5P70178 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six5P70178 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six5P70178 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Six5P70178 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC14.13□□□□□ -0.15
Six5P70178 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Six5P70178 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six5P70178 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six5P70178 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six5P70178 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six5P70178 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Six5P70178 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.13□□□□□ -0.15
Six5P70178 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Six5P70178 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.13□□□□□ -0.15
Six5P70178 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.13□□□□□ -0.15
Six5P70178 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six5P70178 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six5P70178 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Six5P70178 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Six5P70178 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six5P70178 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Six5P70178 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.13□□□□□ -0.15
Six5P70178 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six5P70178 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Six5P70178 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six5P70178 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six5P70178 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six5P70178 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.13□□□□□ -0.15
Six5P70178 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six5P70178 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six5P70178 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Six5P70178 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Six5P70178 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Six5P70178 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Six5P70178 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Six5P70178 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Six5P70178 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Six5P70178 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Six5P70178 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Six5P70178 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Six5P70178 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.12□□□□□ -0.15
Six5P70178 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms