Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
ThraP63058 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ThraP63058 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
ThraP63058 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ThraP63058 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ThraP63058 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ThraP63058 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ThraP63058 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
ThraP63058 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.31■□□□□ 0.04
ThraP63058 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
ThraP63058 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ThraP63058 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ThraP63058 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
ThraP63058 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ThraP63058 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC15.31■□□□□ 0.04
ThraP63058 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
ThraP63058 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ThraP63058 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC15.31■□□□□ 0.04
ThraP63058 CT943659.1-201ENSMUST00000215459 326 ntBASIC15.31■□□□□ 0.04
ThraP63058 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
ThraP63058 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ThraP63058 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
ThraP63058 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ThraP63058 AC131586.3-201ENSMUST00000228355 1367 ntBASIC15.31■□□□□ 0.04
ThraP63058 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ThraP63058 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.31■□□□□ 0.04
ThraP63058 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC15.31■□□□□ 0.04
ThraP63058 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ThraP63058 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ThraP63058 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ThraP63058 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
ThraP63058 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.31■□□□□ 0.04
ThraP63058 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ThraP63058 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ThraP63058 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ThraP63058 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
ThraP63058 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ThraP63058 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ThraP63058 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ThraP63058 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ThraP63058 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ThraP63058 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
ThraP63058 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
ThraP63058 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
ThraP63058 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.3■□□□□ 0.04
ThraP63058 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.3■□□□□ 0.04
ThraP63058 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ThraP63058 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.3■□□□□ 0.04
ThraP63058 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.3■□□□□ 0.04
ThraP63058 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.3■□□□□ 0.04
ThraP63058 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.3■□□□□ 0.04
ThraP63058 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.3■□□□□ 0.04
ThraP63058 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.3■□□□□ 0.04
ThraP63058 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.3■□□□□ 0.04
ThraP63058 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.3■□□□□ 0.04
ThraP63058 Gm8825-201ENSMUST00000182565 998 ntBASIC15.3■□□□□ 0.04
ThraP63058 Gm4518-201ENSMUST00000182638 718 ntBASIC15.3■□□□□ 0.04
ThraP63058 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.3■□□□□ 0.04
ThraP63058 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.3■□□□□ 0.04
ThraP63058 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.3■□□□□ 0.04
ThraP63058 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ThraP63058 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC15.3■□□□□ 0.04
ThraP63058 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.3■□□□□ 0.04
ThraP63058 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ThraP63058 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ThraP63058 AC159106.1-201ENSMUST00000224421 690 ntBASIC15.3■□□□□ 0.04
ThraP63058 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ThraP63058 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ThraP63058 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
ThraP63058 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.3■□□□□ 0.04
ThraP63058 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.3■□□□□ 0.04
ThraP63058 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.3■□□□□ 0.04
ThraP63058 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
ThraP63058 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
ThraP63058 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ThraP63058 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
ThraP63058 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
ThraP63058 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ThraP63058 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ThraP63058 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ThraP63058 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ThraP63058 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ThraP63058 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
ThraP63058 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ThraP63058 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
ThraP63058 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ThraP63058 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC15.29■□□□□ 0.04
ThraP63058 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ThraP63058 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC15.29■□□□□ 0.04
ThraP63058 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ThraP63058 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
ThraP63058 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC15.29■□□□□ 0.04
ThraP63058 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ThraP63058 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.29■□□□□ 0.04
ThraP63058 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ThraP63058 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ThraP63058 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ThraP63058 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ThraP63058 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
ThraP63058 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms