Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lhx1P63006 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lhx1P63006 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lhx1P63006 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lhx1P63006 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lhx1P63006 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.82□□□□□ -0.04
Lhx1P63006 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lhx1P63006 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lhx1P63006 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lhx1P63006 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.81□□□□□ -0.04
Lhx1P63006 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lhx1P63006 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lhx1P63006 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lhx1P63006 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
Lhx1P63006 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lhx1P63006 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lhx1P63006 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Lhx1P63006 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lhx1P63006 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Lhx1P63006 Gm26308-201ENSMUST00000157768 69 ntBASIC14.81□□□□□ -0.04
Lhx1P63006 Gm16026-204ENSMUST00000162652 683 ntBASIC14.81□□□□□ -0.04
Lhx1P63006 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.81□□□□□ -0.04
Lhx1P63006 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Lhx1P63006 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lhx1P63006 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Lhx1P63006 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lhx1P63006 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lhx1P63006 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lhx1P63006 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lhx1P63006 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lhx1P63006 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lhx1P63006 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lhx1P63006 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Lhx1P63006 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lhx1P63006 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lhx1P63006 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Lhx1P63006 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Lhx1P63006 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lhx1P63006 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lhx1P63006 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lhx1P63006 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Lhx1P63006 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lhx1P63006 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.8□□□□□ -0.04
Lhx1P63006 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lhx1P63006 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Lhx1P63006 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lhx1P63006 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lhx1P63006 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lhx1P63006 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lhx1P63006 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Lhx1P63006 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lhx1P63006 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.8□□□□□ -0.04
Lhx1P63006 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.8□□□□□ -0.04
Lhx1P63006 Chchd1-203ENSMUST00000224633 557 ntBASIC14.8□□□□□ -0.04
Lhx1P63006 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lhx1P63006 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lhx1P63006 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Lhx1P63006 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC14.8□□□□□ -0.04
Lhx1P63006 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lhx1P63006 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.8□□□□□ -0.04
Lhx1P63006 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Lhx1P63006 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Lhx1P63006 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.8□□□□□ -0.04
Lhx1P63006 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lhx1P63006 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lhx1P63006 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Lhx1P63006 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lhx1P63006 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Lhx1P63006 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lhx1P63006 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lhx1P63006 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lhx1P63006 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Lhx1P63006 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lhx1P63006 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lhx1P63006 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lhx1P63006 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lhx1P63006 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lhx1P63006 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lhx1P63006 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.79□□□□□ -0.04
Lhx1P63006 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.79□□□□□ -0.04
Lhx1P63006 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Lhx1P63006 Rprl2-201ENSMUST00000157150 290 ntBASIC14.79□□□□□ -0.04
Lhx1P63006 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Lhx1P63006 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lhx1P63006 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14.79□□□□□ -0.04
Lhx1P63006 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Lhx1P63006 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lhx1P63006 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lhx1P63006 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Lhx1P63006 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.79□□□□□ -0.04
Lhx1P63006 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.79□□□□□ -0.04
Lhx1P63006 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lhx1P63006 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lhx1P63006 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lhx1P63006 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lhx1P63006 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Lhx1P63006 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Lhx1P63006 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lhx1P63006 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lhx1P63006 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms