Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 AC167013.2-201ENSMUST00000228520 2684 ntBASIC10.8□□□□□ -0.68
Rpl39P62892 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rpl39P62892 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rpl39P62892 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rpl39P62892 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rpl39P62892 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rpl39P62892 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
Rpl39P62892 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rpl39P62892 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rpl39P62892 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rpl39P62892 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rpl39P62892 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Rpl39P62892 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC10.79□□□□□ -0.68
Rpl39P62892 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rpl39P62892 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rpl39P62892 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rpl39P62892 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
Rpl39P62892 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rpl39P62892 Gm20472-201ENSMUST00000174403 1240 ntBASIC10.79□□□□□ -0.68
Rpl39P62892 Gm7507-201ENSMUST00000183053 1008 ntBASIC10.79□□□□□ -0.68
Rpl39P62892 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rpl39P62892 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rpl39P62892 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC10.79□□□□□ -0.68
Rpl39P62892 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rpl39P62892 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rpl39P62892 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rpl39P62892 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rpl39P62892 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rpl39P62892 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Rpl39P62892 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rpl39P62892 Grk6-207ENSMUST00000225925 2769 ntBASIC10.79□□□□□ -0.68
Rpl39P62892 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rpl39P62892 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC10.79□□□□□ -0.68
Rpl39P62892 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Rpl39P62892 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rpl39P62892 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rpl39P62892 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Rpl39P62892 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rpl39P62892 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rpl39P62892 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rpl39P62892 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rpl39P62892 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rpl39P62892 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rpl39P62892 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rpl39P62892 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rpl39P62892 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rpl39P62892 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rpl39P62892 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rpl39P62892 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rpl39P62892 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rpl39P62892 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rpl39P62892 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rpl39P62892 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rpl39P62892 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC10.78□□□□□ -0.68
Rpl39P62892 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Rpl39P62892 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rpl39P62892 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rpl39P62892 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Rpl39P62892 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Rpl39P62892 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC10.78□□□□□ -0.68
Rpl39P62892 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rpl39P62892 Gm9484-201ENSMUST00000195892 1159 ntBASIC10.78□□□□□ -0.68
Rpl39P62892 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC10.78□□□□□ -0.68
Rpl39P62892 Gm45058-201ENSMUST00000205810 766 ntBASIC10.78□□□□□ -0.68
Rpl39P62892 Gm18959-201ENSMUST00000208954 655 ntBASIC10.78□□□□□ -0.68
Rpl39P62892 Gm21559-201ENSMUST00000220638 855 ntBASIC10.78□□□□□ -0.68
Rpl39P62892 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC10.78□□□□□ -0.68
Rpl39P62892 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rpl39P62892 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rpl39P62892 Gm8587-201ENSMUST00000076538 843 ntBASIC10.78□□□□□ -0.68
Rpl39P62892 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC10.78□□□□□ -0.68
Rpl39P62892 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rpl39P62892 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rpl39P62892 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Rpl39P62892 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rpl39P62892 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Rpl39P62892 Gm9856-201ENSMUST00000217077 2578 ntBASIC10.78□□□□□ -0.68
Rpl39P62892 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rpl39P62892 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rpl39P62892 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rpl39P62892 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC10.78□□□□□ -0.68
Rpl39P62892 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rpl39P62892 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rpl39P62892 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC10.78□□□□□ -0.68
Rpl39P62892 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rpl39P62892 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rpl39P62892 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rpl39P62892 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Rpl39P62892 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Rpl39P62892 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC10.77□□□□□ -0.68
Rpl39P62892 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Rpl39P62892 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Rpl39P62892 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Rpl39P62892 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Rpl39P62892 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rpl39P62892 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Rpl39P62892 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rpl39P62892 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.69
Rpl39P62892 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Rpl39P62892 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms