Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Msh6P54276 AC132863.2-201ENSMUST00000226643 799 ntBASIC19.04■□□□□ 0.64
Msh6P54276 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Msh6P54276 Gm8096-201ENSMUST00000209921 1591 ntBASIC19.04■□□□□ 0.64
Msh6P54276 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Msh6P54276 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Msh6P54276 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Msh6P54276 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Msh6P54276 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
Msh6P54276 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Msh6P54276 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Msh6P54276 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Msh6P54276 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Msh6P54276 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Msh6P54276 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Msh6P54276 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Msh6P54276 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Msh6P54276 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Msh6P54276 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Msh6P54276 Gm14767-201ENSMUST00000121559 586 ntBASIC19.03■□□□□ 0.64
Msh6P54276 Gm15487-201ENSMUST00000122373 465 ntBASIC19.03■□□□□ 0.64
Msh6P54276 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC19.03■□□□□ 0.64
Msh6P54276 Gm18766-201ENSMUST00000189811 808 ntBASIC19.03■□□□□ 0.64
Msh6P54276 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Msh6P54276 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Msh6P54276 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Msh6P54276 AC131743.5-201ENSMUST00000220775 1618 ntBASIC19.03■□□□□ 0.64
Msh6P54276 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Msh6P54276 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Msh6P54276 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Msh6P54276 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC19.03■□□□□ 0.64
Msh6P54276 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Msh6P54276 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC19.02■□□□□ 0.64
Msh6P54276 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Msh6P54276 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Msh6P54276 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Msh6P54276 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Msh6P54276 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Msh6P54276 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Msh6P54276 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Msh6P54276 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Msh6P54276 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Msh6P54276 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Msh6P54276 Gm7775-201ENSMUST00000218871 853 ntBASIC19.02■□□□□ 0.64
Msh6P54276 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Msh6P54276 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Msh6P54276 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Msh6P54276 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Msh6P54276 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Msh6P54276 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Msh6P54276 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Msh6P54276 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Msh6P54276 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Msh6P54276 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Msh6P54276 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Msh6P54276 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC19.01■□□□□ 0.63
Msh6P54276 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Msh6P54276 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Msh6P54276 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
Msh6P54276 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Msh6P54276 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Msh6P54276 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Msh6P54276 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Msh6P54276 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Msh6P54276 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Msh6P54276 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Msh6P54276 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
Msh6P54276 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC19.01■□□□□ 0.63
Msh6P54276 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Msh6P54276 Gm15593-201ENSMUST00000122085 1008 ntBASIC19.01■□□□□ 0.63
Msh6P54276 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC19.01■□□□□ 0.63
Msh6P54276 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC19.01■□□□□ 0.63
Msh6P54276 Gm10313-201ENSMUST00000095320 1002 ntBASIC19.01■□□□□ 0.63
Msh6P54276 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Msh6P54276 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Msh6P54276 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Msh6P54276 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Msh6P54276 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Msh6P54276 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Msh6P54276 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Msh6P54276 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Msh6P54276 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Msh6P54276 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Msh6P54276 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Msh6P54276 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Msh6P54276 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC19■□□□□ 0.63
Msh6P54276 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC19■□□□□ 0.63
Msh6P54276 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC19■□□□□ 0.63
Msh6P54276 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Msh6P54276 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Msh6P54276 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC19■□□□□ 0.63
Msh6P54276 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Msh6P54276 Gm27920-201ENSMUST00000183953 96 ntBASIC19■□□□□ 0.63
Msh6P54276 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Msh6P54276 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Msh6P54276 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Msh6P54276 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC19■□□□□ 0.63
Msh6P54276 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Msh6P54276 Gm13233-201ENSMUST00000118760 1443 ntBASIC19■□□□□ 0.63
Msh6P54276 Gm13244-201ENSMUST00000118855 1446 ntBASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms