Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LtbrP50284 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LtbrP50284 Gm6973-201ENSMUST00000117080 721 ntBASIC17.71■□□□□ 0.43
LtbrP50284 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC17.71■□□□□ 0.43
LtbrP50284 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LtbrP50284 Gm14719-201ENSMUST00000121891 340 ntBASIC17.71■□□□□ 0.43
LtbrP50284 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC17.71■□□□□ 0.43
LtbrP50284 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
LtbrP50284 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
LtbrP50284 Gm2272-201ENSMUST00000194903 582 ntBASIC17.71■□□□□ 0.43
LtbrP50284 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LtbrP50284 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
LtbrP50284 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
LtbrP50284 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LtbrP50284 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
LtbrP50284 Gm5184-201ENSMUST00000220417 1702 ntBASIC17.71■□□□□ 0.43
LtbrP50284 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LtbrP50284 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LtbrP50284 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
LtbrP50284 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
LtbrP50284 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
LtbrP50284 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC17.7■□□□□ 0.42
LtbrP50284 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC17.7■□□□□ 0.42
LtbrP50284 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
LtbrP50284 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
LtbrP50284 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LtbrP50284 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LtbrP50284 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LtbrP50284 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
LtbrP50284 Gm14928-201ENSMUST00000120198 477 ntBASIC17.7■□□□□ 0.42
LtbrP50284 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC17.7■□□□□ 0.42
LtbrP50284 Gm15487-201ENSMUST00000122373 465 ntBASIC17.7■□□□□ 0.42
LtbrP50284 AC124732.1-201ENSMUST00000221551 910 ntBASIC17.7■□□□□ 0.42
LtbrP50284 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC17.7■□□□□ 0.42
LtbrP50284 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.7■□□□□ 0.42
LtbrP50284 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LtbrP50284 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LtbrP50284 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC17.7■□□□□ 0.42
LtbrP50284 Gm10154-201ENSMUST00000084445 354 ntBASIC17.7■□□□□ 0.42
LtbrP50284 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
LtbrP50284 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
LtbrP50284 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LtbrP50284 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LtbrP50284 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LtbrP50284 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
LtbrP50284 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LtbrP50284 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC17.7■□□□□ 0.42
LtbrP50284 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LtbrP50284 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LtbrP50284 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.7■□□□□ 0.42
LtbrP50284 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LtbrP50284 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LtbrP50284 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LtbrP50284 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LtbrP50284 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
LtbrP50284 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LtbrP50284 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LtbrP50284 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LtbrP50284 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LtbrP50284 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LtbrP50284 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LtbrP50284 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
LtbrP50284 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LtbrP50284 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LtbrP50284 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
LtbrP50284 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LtbrP50284 Gm8410-201ENSMUST00000117225 605 ntBASIC17.69■□□□□ 0.42
LtbrP50284 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC17.69■□□□□ 0.42
LtbrP50284 Gm43930-201ENSMUST00000203868 845 ntBASIC17.69■□□□□ 0.42
LtbrP50284 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LtbrP50284 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LtbrP50284 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LtbrP50284 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC17.69■□□□□ 0.42
LtbrP50284 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LtbrP50284 AC163637.1-201ENSMUST00000215491 1894 ntBASIC17.69■□□□□ 0.42
LtbrP50284 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LtbrP50284 Gm15163-201ENSMUST00000120749 1302 ntBASIC17.69■□□□□ 0.42
LtbrP50284 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LtbrP50284 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LtbrP50284 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LtbrP50284 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LtbrP50284 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LtbrP50284 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
LtbrP50284 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LtbrP50284 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
LtbrP50284 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LtbrP50284 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LtbrP50284 Gm6912-201ENSMUST00000117218 544 ntBASIC17.68■□□□□ 0.42
LtbrP50284 Gm15653-201ENSMUST00000119247 907 ntBASIC17.68■□□□□ 0.42
LtbrP50284 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC17.68■□□□□ 0.42
LtbrP50284 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC17.68■□□□□ 0.42
LtbrP50284 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LtbrP50284 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.68■□□□□ 0.42
LtbrP50284 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LtbrP50284 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
LtbrP50284 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LtbrP50284 Syt7-204ENSMUST00000223586 1344 ntBASIC17.68■□□□□ 0.42
LtbrP50284 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LtbrP50284 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
LtbrP50284 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms