Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GdnfP48540 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
GdnfP48540 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
GdnfP48540 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
GdnfP48540 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
GdnfP48540 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
GdnfP48540 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GdnfP48540 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
GdnfP48540 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
GdnfP48540 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GdnfP48540 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
GdnfP48540 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
GdnfP48540 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
GdnfP48540 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GdnfP48540 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
GdnfP48540 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
GdnfP48540 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
GdnfP48540 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
GdnfP48540 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
GdnfP48540 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
GdnfP48540 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
GdnfP48540 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
GdnfP48540 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
GdnfP48540 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
GdnfP48540 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
GdnfP48540 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
GdnfP48540 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.25□□□□□ -0.29
GdnfP48540 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
GdnfP48540 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
GdnfP48540 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
GdnfP48540 Gm17807-201ENSMUST00000186869 298 ntBASIC13.25□□□□□ -0.29
GdnfP48540 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
GdnfP48540 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
GdnfP48540 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
GdnfP48540 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
GdnfP48540 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
GdnfP48540 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
GdnfP48540 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
GdnfP48540 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
GdnfP48540 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
GdnfP48540 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
GdnfP48540 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
GdnfP48540 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
GdnfP48540 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
GdnfP48540 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
GdnfP48540 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
GdnfP48540 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
GdnfP48540 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
GdnfP48540 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
GdnfP48540 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.24□□□□□ -0.29
GdnfP48540 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC13.24□□□□□ -0.29
GdnfP48540 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
GdnfP48540 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
GdnfP48540 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC13.24□□□□□ -0.29
GdnfP48540 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
GdnfP48540 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC13.24□□□□□ -0.29
GdnfP48540 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
GdnfP48540 Gm10459-201ENSMUST00000202708 1155 ntBASIC13.24□□□□□ -0.29
GdnfP48540 AC124569.2-201ENSMUST00000225998 818 ntBASIC13.24□□□□□ -0.29
GdnfP48540 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
GdnfP48540 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
GdnfP48540 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.24□□□□□ -0.29
GdnfP48540 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
GdnfP48540 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
GdnfP48540 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
GdnfP48540 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
GdnfP48540 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.24□□□□□ -0.29
GdnfP48540 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
GdnfP48540 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
GdnfP48540 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
GdnfP48540 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
GdnfP48540 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
GdnfP48540 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.23□□□□□ -0.29
GdnfP48540 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GdnfP48540 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GdnfP48540 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
GdnfP48540 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
GdnfP48540 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GdnfP48540 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
GdnfP48540 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
GdnfP48540 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC13.23□□□□□ -0.29
GdnfP48540 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GdnfP48540 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GdnfP48540 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
GdnfP48540 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
GdnfP48540 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
GdnfP48540 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
GdnfP48540 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
GdnfP48540 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC13.23□□□□□ -0.29
GdnfP48540 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
GdnfP48540 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
GdnfP48540 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
GdnfP48540 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
GdnfP48540 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GdnfP48540 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
GdnfP48540 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GdnfP48540 Gm10819-201ENSMUST00000099988 561 ntBASIC13.23□□□□□ -0.29
GdnfP48540 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GdnfP48540 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
GdnfP48540 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms