Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC13.68□□□□□ -0.22
Rfx3P48381 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rfx3P48381 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC13.68□□□□□ -0.22
Rfx3P48381 Gm18669-201ENSMUST00000216049 778 ntBASIC13.68□□□□□ -0.22
Rfx3P48381 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC13.68□□□□□ -0.22
Rfx3P48381 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC13.68□□□□□ -0.22
Rfx3P48381 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfx3P48381 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfx3P48381 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfx3P48381 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Rfx3P48381 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfx3P48381 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfx3P48381 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfx3P48381 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfx3P48381 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Rfx3P48381 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfx3P48381 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Rfx3P48381 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfx3P48381 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfx3P48381 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rfx3P48381 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfx3P48381 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rfx3P48381 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfx3P48381 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rfx3P48381 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC13.67□□□□□ -0.22
Rfx3P48381 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC13.67□□□□□ -0.22
Rfx3P48381 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC13.67□□□□□ -0.22
Rfx3P48381 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC13.67□□□□□ -0.22
Rfx3P48381 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC13.67□□□□□ -0.22
Rfx3P48381 Cmtm5-203ENSMUST00000227441 610 ntBASIC13.67□□□□□ -0.22
Rfx3P48381 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfx3P48381 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfx3P48381 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.67□□□□□ -0.22
Rfx3P48381 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfx3P48381 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rfx3P48381 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfx3P48381 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rfx3P48381 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.67□□□□□ -0.22
Rfx3P48381 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.67□□□□□ -0.22
Rfx3P48381 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rfx3P48381 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.67□□□□□ -0.22
Rfx3P48381 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfx3P48381 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfx3P48381 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfx3P48381 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfx3P48381 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Rfx3P48381 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfx3P48381 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rfx3P48381 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rfx3P48381 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfx3P48381 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfx3P48381 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Rfx3P48381 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC13.66□□□□□ -0.22
Rfx3P48381 Gm8344-201ENSMUST00000119813 856 ntBASIC13.66□□□□□ -0.22
Rfx3P48381 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC13.66□□□□□ -0.22
Rfx3P48381 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Rfx3P48381 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfx3P48381 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfx3P48381 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rfx3P48381 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rfx3P48381 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.66□□□□□ -0.22
Rfx3P48381 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Rfx3P48381 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfx3P48381 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC13.66□□□□□ -0.22
Rfx3P48381 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfx3P48381 Gm13337-201ENSMUST00000119183 1594 ntBASIC13.66□□□□□ -0.22
Rfx3P48381 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfx3P48381 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfx3P48381 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
Rfx3P48381 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rfx3P48381 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rfx3P48381 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rfx3P48381 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.65□□□□□ -0.22
Rfx3P48381 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rfx3P48381 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rfx3P48381 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Rfx3P48381 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rfx3P48381 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rfx3P48381 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.65□□□□□ -0.22
Rfx3P48381 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rfx3P48381 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Rfx3P48381 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Rfx3P48381 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rfx3P48381 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Rfx3P48381 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rfx3P48381 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Rfx3P48381 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC13.65□□□□□ -0.22
Rfx3P48381 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rfx3P48381 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rfx3P48381 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.65□□□□□ -0.22
Rfx3P48381 Gm5837-201ENSMUST00000191844 1369 ntBASIC13.65□□□□□ -0.22
Rfx3P48381 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.65□□□□□ -0.22
Rfx3P48381 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rfx3P48381 Efs-202ENSMUST00000227037 2540 ntBASIC13.65□□□□□ -0.22
Rfx3P48381 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rfx3P48381 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Rfx3P48381 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Rfx3P48381 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rfx3P48381 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC13.65□□□□□ -0.22
Rfx3P48381 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms