Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.49■□□□□ 0.07
Cxcl12P40224 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cxcl12P40224 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Cxcl12P40224 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cxcl12P40224 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cxcl12P40224 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cxcl12P40224 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cxcl12P40224 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cxcl12P40224 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Cxcl12P40224 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cxcl12P40224 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cxcl12P40224 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
Cxcl12P40224 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Cxcl12P40224 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Cxcl12P40224 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cxcl12P40224 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cxcl12P40224 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Cxcl12P40224 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Cxcl12P40224 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cxcl12P40224 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cxcl12P40224 Gm15806-201ENSMUST00000120696 955 ntBASIC15.48■□□□□ 0.07
Cxcl12P40224 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC15.48■□□□□ 0.07
Cxcl12P40224 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cxcl12P40224 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cxcl12P40224 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cxcl12P40224 Gm37811-201ENSMUST00000192416 2601 ntBASIC15.48■□□□□ 0.07
Cxcl12P40224 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cxcl12P40224 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cxcl12P40224 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cxcl12P40224 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Cxcl12P40224 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cxcl12P40224 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cxcl12P40224 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cxcl12P40224 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cxcl12P40224 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cxcl12P40224 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cxcl12P40224 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cxcl12P40224 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cxcl12P40224 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cxcl12P40224 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cxcl12P40224 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC15.47■□□□□ 0.07
Cxcl12P40224 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Cxcl12P40224 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC15.47■□□□□ 0.07
Cxcl12P40224 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Cxcl12P40224 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC15.47■□□□□ 0.07
Cxcl12P40224 AY702102-202ENSMUST00000194651 1173 ntBASIC15.47■□□□□ 0.07
Cxcl12P40224 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Cxcl12P40224 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC15.47■□□□□ 0.07
Cxcl12P40224 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cxcl12P40224 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Cxcl12P40224 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cxcl12P40224 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Cxcl12P40224 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Cxcl12P40224 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Cxcl12P40224 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cxcl12P40224 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC15.47■□□□□ 0.07
Cxcl12P40224 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.47■□□□□ 0.07
Cxcl12P40224 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Cxcl12P40224 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.47■□□□□ 0.07
Cxcl12P40224 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cxcl12P40224 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Cxcl12P40224 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Cxcl12P40224 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Cxcl12P40224 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cxcl12P40224 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cxcl12P40224 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.46■□□□□ 0.07
Cxcl12P40224 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Cxcl12P40224 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cxcl12P40224 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC15.46■□□□□ 0.07
Cxcl12P40224 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Cxcl12P40224 Mir6392-201ENSMUST00000184924 108 ntBASIC15.46■□□□□ 0.07
Cxcl12P40224 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC15.46■□□□□ 0.07
Cxcl12P40224 Gm7390-201ENSMUST00000212452 1216 ntBASIC15.46■□□□□ 0.07
Cxcl12P40224 Gm18624-201ENSMUST00000220966 658 ntBASIC15.46■□□□□ 0.07
Cxcl12P40224 Gm16476-201ENSMUST00000221544 139 ntBASIC15.46■□□□□ 0.07
Cxcl12P40224 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cxcl12P40224 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cxcl12P40224 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cxcl12P40224 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
Cxcl12P40224 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cxcl12P40224 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Cxcl12P40224 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Cxcl12P40224 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15.46■□□□□ 0.06
Cxcl12P40224 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
Cxcl12P40224 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC15.45■□□□□ 0.06
Cxcl12P40224 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Cxcl12P40224 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
Cxcl12P40224 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cxcl12P40224 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Cxcl12P40224 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cxcl12P40224 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cxcl12P40224 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cxcl12P40224 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Cxcl12P40224 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cxcl12P40224 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Cxcl12P40224 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Cxcl12P40224 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Cxcl12P40224 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC15.45■□□□□ 0.06
Cxcl12P40224 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC15.45■□□□□ 0.06
Cxcl12P40224 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms