Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
LdlrP35951 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
LdlrP35951 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LdlrP35951 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
LdlrP35951 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
LdlrP35951 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.03■□□□□ -0
LdlrP35951 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
LdlrP35951 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.03■□□□□ -0
LdlrP35951 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC15.03■□□□□ -0
LdlrP35951 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
LdlrP35951 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
LdlrP35951 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.03■□□□□ -0
LdlrP35951 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LdlrP35951 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
LdlrP35951 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
LdlrP35951 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
LdlrP35951 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC15.03■□□□□ -0
LdlrP35951 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LdlrP35951 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
LdlrP35951 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.03■□□□□ -0
LdlrP35951 Gm8000-201ENSMUST00000188378 592 ntBASIC15.03■□□□□ -0
LdlrP35951 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC15.03■□□□□ -0
LdlrP35951 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.03■□□□□ -0
LdlrP35951 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LdlrP35951 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LdlrP35951 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC15.03■□□□□ -0
LdlrP35951 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
LdlrP35951 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
LdlrP35951 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LdlrP35951 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LdlrP35951 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
LdlrP35951 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LdlrP35951 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
LdlrP35951 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LdlrP35951 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LdlrP35951 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LdlrP35951 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
LdlrP35951 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.02■□□□□ -0
LdlrP35951 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.02■□□□□ -0
LdlrP35951 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LdlrP35951 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
LdlrP35951 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LdlrP35951 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LdlrP35951 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.02■□□□□ -0
LdlrP35951 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LdlrP35951 Gm12350-201ENSMUST00000121208 462 ntBASIC15.02■□□□□ -0
LdlrP35951 Gm44357-201ENSMUST00000195897 142 ntBASIC15.02■□□□□ -0
LdlrP35951 Gm19658-201ENSMUST00000196231 138 ntBASIC15.02■□□□□ -0
LdlrP35951 Gm44367-201ENSMUST00000196836 138 ntBASIC15.02■□□□□ -0
LdlrP35951 Gm44350-201ENSMUST00000197197 138 ntBASIC15.02■□□□□ -0
LdlrP35951 Gm44390-201ENSMUST00000197533 144 ntBASIC15.02■□□□□ -0
LdlrP35951 Gm44313-201ENSMUST00000198018 138 ntBASIC15.02■□□□□ -0
LdlrP35951 Gm44486-201ENSMUST00000198508 138 ntBASIC15.02■□□□□ -0
LdlrP35951 Gm44454-201ENSMUST00000198541 138 ntBASIC15.02■□□□□ -0
LdlrP35951 Gm44314-201ENSMUST00000199263 138 ntBASIC15.02■□□□□ -0
LdlrP35951 Gm44394-201ENSMUST00000199558 138 ntBASIC15.02■□□□□ -0
LdlrP35951 Gm44484-201ENSMUST00000199873 138 ntBASIC15.02■□□□□ -0
LdlrP35951 Gm44466-201ENSMUST00000200264 138 ntBASIC15.02■□□□□ -0
LdlrP35951 Gm44359-201ENSMUST00000200671 138 ntBASIC15.02■□□□□ -0
LdlrP35951 Gm7556-201ENSMUST00000201178 1084 ntBASIC15.02■□□□□ -0
LdlrP35951 Gm9172-201ENSMUST00000212092 954 ntBASIC15.02■□□□□ -0
LdlrP35951 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.02■□□□□ -0
LdlrP35951 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LdlrP35951 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC15.02□□□□□ -0.01
LdlrP35951 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
LdlrP35951 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LdlrP35951 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
LdlrP35951 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LdlrP35951 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
LdlrP35951 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LdlrP35951 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
LdlrP35951 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
LdlrP35951 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
LdlrP35951 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LdlrP35951 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.02□□□□□ -0.01
LdlrP35951 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LdlrP35951 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LdlrP35951 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LdlrP35951 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LdlrP35951 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
LdlrP35951 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LdlrP35951 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LdlrP35951 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.01□□□□□ -0.01
LdlrP35951 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LdlrP35951 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LdlrP35951 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
LdlrP35951 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LdlrP35951 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LdlrP35951 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LdlrP35951 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.01□□□□□ -0.01
LdlrP35951 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LdlrP35951 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LdlrP35951 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LdlrP35951 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LdlrP35951 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LdlrP35951 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LdlrP35951 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
LdlrP35951 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LdlrP35951 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LdlrP35951 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms