Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nedd8P29595 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nedd8P29595 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nedd8P29595 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nedd8P29595 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nedd8P29595 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nedd8P29595 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nedd8P29595 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Nedd8P29595 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.02□□□□□ -0.17
Nedd8P29595 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nedd8P29595 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nedd8P29595 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.01□□□□□ -0.17
Nedd8P29595 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nedd8P29595 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nedd8P29595 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nedd8P29595 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nedd8P29595 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nedd8P29595 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nedd8P29595 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nedd8P29595 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nedd8P29595 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nedd8P29595 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Nedd8P29595 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nedd8P29595 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Nedd8P29595 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nedd8P29595 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC14.01□□□□□ -0.17
Nedd8P29595 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nedd8P29595 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nedd8P29595 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nedd8P29595 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nedd8P29595 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nedd8P29595 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nedd8P29595 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nedd8P29595 Carlr-201ENSMUST00000181515 2574 ntBASIC14.01□□□□□ -0.17
Nedd8P29595 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nedd8P29595 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.01□□□□□ -0.17
Nedd8P29595 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nedd8P29595 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nedd8P29595 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nedd8P29595 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nedd8P29595 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nedd8P29595 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nedd8P29595 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.01□□□□□ -0.17
Nedd8P29595 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nedd8P29595 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nedd8P29595 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Nedd8P29595 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nedd8P29595 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Nedd8P29595 Gm9889-202ENSMUST00000206983 1577 ntBASIC14□□□□□ -0.17
Nedd8P29595 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nedd8P29595 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nedd8P29595 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Nedd8P29595 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Nedd8P29595 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Nedd8P29595 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nedd8P29595 Ksr1-207ENSMUST00000226282 5260 ntBASIC14□□□□□ -0.17
Nedd8P29595 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Nedd8P29595 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Nedd8P29595 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nedd8P29595 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nedd8P29595 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Nedd8P29595 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC14□□□□□ -0.17
Nedd8P29595 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nedd8P29595 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nedd8P29595 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Nedd8P29595 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14□□□□□ -0.17
Nedd8P29595 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC14□□□□□ -0.17
Nedd8P29595 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Nedd8P29595 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nedd8P29595 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Nedd8P29595 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
Nedd8P29595 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Nedd8P29595 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nedd8P29595 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nedd8P29595 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Nedd8P29595 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Nedd8P29595 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Nedd8P29595 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14□□□□□ -0.17
Nedd8P29595 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Nedd8P29595 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Nedd8P29595 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14□□□□□ -0.17
Nedd8P29595 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nedd8P29595 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nedd8P29595 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nedd8P29595 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.99□□□□□ -0.17
Nedd8P29595 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nedd8P29595 Prkcz2-201ENSMUST00000206136 1756 ntBASIC13.99□□□□□ -0.17
Nedd8P29595 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nedd8P29595 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC13.99□□□□□ -0.17
Nedd8P29595 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nedd8P29595 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Nedd8P29595 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nedd8P29595 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nedd8P29595 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nedd8P29595 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Nedd8P29595 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nedd8P29595 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.99□□□□□ -0.17
Nedd8P29595 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC13.99□□□□□ -0.17
Nedd8P29595 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC13.99□□□□□ -0.17
Nedd8P29595 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms