Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Ccl6P27784 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Ccl6P27784 Gm7153-201ENSMUST00000117092 455 ntBASIC11.8□□□□□ -0.52
Ccl6P27784 Gm15358-201ENSMUST00000119249 520 ntBASIC11.8□□□□□ -0.52
Ccl6P27784 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC11.8□□□□□ -0.52
Ccl6P27784 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC11.8□□□□□ -0.52
Ccl6P27784 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl6P27784 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Ccl6P27784 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl6P27784 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl6P27784 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl6P27784 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl6P27784 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl6P27784 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC11.8□□□□□ -0.52
Ccl6P27784 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Ccl6P27784 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl6P27784 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl6P27784 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl6P27784 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl6P27784 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl6P27784 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ccl6P27784 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccl6P27784 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ccl6P27784 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccl6P27784 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC11.79□□□□□ -0.52
Ccl6P27784 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccl6P27784 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccl6P27784 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC11.79□□□□□ -0.52
Ccl6P27784 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccl6P27784 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccl6P27784 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccl6P27784 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccl6P27784 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
Ccl6P27784 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccl6P27784 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Ccl6P27784 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccl6P27784 AC158538.2-201ENSMUST00000225455 906 ntBASIC11.79□□□□□ -0.52
Ccl6P27784 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Ccl6P27784 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccl6P27784 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccl6P27784 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccl6P27784 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccl6P27784 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccl6P27784 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccl6P27784 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccl6P27784 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ccl6P27784 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccl6P27784 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Ccl6P27784 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Ccl6P27784 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Ccl6P27784 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccl6P27784 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC11.79□□□□□ -0.52
Ccl6P27784 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC11.79□□□□□ -0.52
Ccl6P27784 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccl6P27784 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl6P27784 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl6P27784 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC11.78□□□□□ -0.52
Ccl6P27784 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl6P27784 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC11.78□□□□□ -0.52
Ccl6P27784 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl6P27784 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl6P27784 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
Ccl6P27784 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC11.78□□□□□ -0.52
Ccl6P27784 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Ccl6P27784 Gm15173-201ENSMUST00000122049 433 ntBASIC11.78□□□□□ -0.52
Ccl6P27784 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Ccl6P27784 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC11.78□□□□□ -0.52
Ccl6P27784 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC11.78□□□□□ -0.52
Ccl6P27784 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC11.78□□□□□ -0.52
Ccl6P27784 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Ccl6P27784 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl6P27784 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl6P27784 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl6P27784 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl6P27784 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl6P27784 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC11.78□□□□□ -0.52
Ccl6P27784 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Ccl6P27784 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl6P27784 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl6P27784 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl6P27784 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC11.78□□□□□ -0.52
Ccl6P27784 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC11.78□□□□□ -0.52
Ccl6P27784 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC11.77□□□□□ -0.52
Ccl6P27784 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Ccl6P27784 Gm37500-201ENSMUST00000192059 1443 ntBASIC11.77□□□□□ -0.52
Ccl6P27784 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ccl6P27784 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC11.77□□□□□ -0.52
Ccl6P27784 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Ccl6P27784 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ccl6P27784 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ccl6P27784 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ccl6P27784 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccl6P27784 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccl6P27784 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
Ccl6P27784 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ccl6P27784 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccl6P27784 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccl6P27784 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccl6P27784 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccl6P27784 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms