Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.1□□□□□ -0.15
Clk1P22518 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clk1P22518 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.1□□□□□ -0.15
Clk1P22518 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.1□□□□□ -0.15
Clk1P22518 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Clk1P22518 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Clk1P22518 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clk1P22518 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clk1P22518 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clk1P22518 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clk1P22518 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clk1P22518 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clk1P22518 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clk1P22518 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Clk1P22518 Gm45053-201ENSMUST00000206112 2499 ntBASIC14.09□□□□□ -0.15
Clk1P22518 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clk1P22518 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clk1P22518 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clk1P22518 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clk1P22518 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clk1P22518 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.09□□□□□ -0.15
Clk1P22518 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clk1P22518 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clk1P22518 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.09□□□□□ -0.15
Clk1P22518 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clk1P22518 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Clk1P22518 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.09□□□□□ -0.15
Clk1P22518 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.09□□□□□ -0.15
Clk1P22518 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Clk1P22518 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
Clk1P22518 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.09□□□□□ -0.15
Clk1P22518 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.09□□□□□ -0.15
Clk1P22518 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Clk1P22518 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clk1P22518 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.09□□□□□ -0.15
Clk1P22518 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clk1P22518 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Clk1P22518 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clk1P22518 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clk1P22518 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clk1P22518 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Clk1P22518 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Clk1P22518 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Clk1P22518 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Clk1P22518 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Clk1P22518 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Clk1P22518 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Clk1P22518 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clk1P22518 Carlr-201ENSMUST00000181515 2574 ntBASIC14.08□□□□□ -0.16
Clk1P22518 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Clk1P22518 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clk1P22518 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.08□□□□□ -0.16
Clk1P22518 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clk1P22518 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.08□□□□□ -0.16
Clk1P22518 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.08□□□□□ -0.16
Clk1P22518 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Clk1P22518 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.08□□□□□ -0.16
Clk1P22518 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.08□□□□□ -0.16
Clk1P22518 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clk1P22518 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.08□□□□□ -0.16
Clk1P22518 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clk1P22518 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clk1P22518 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Clk1P22518 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clk1P22518 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clk1P22518 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Clk1P22518 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clk1P22518 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clk1P22518 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clk1P22518 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Clk1P22518 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clk1P22518 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Clk1P22518 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clk1P22518 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
Clk1P22518 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clk1P22518 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Clk1P22518 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clk1P22518 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clk1P22518 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Clk1P22518 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Clk1P22518 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clk1P22518 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Clk1P22518 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.07□□□□□ -0.16
Clk1P22518 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.07□□□□□ -0.16
Clk1P22518 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Clk1P22518 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clk1P22518 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Clk1P22518 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
Clk1P22518 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clk1P22518 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Clk1P22518 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clk1P22518 Asic1-205ENSMUST00000228185 1818 ntBASIC14.07□□□□□ -0.16
Clk1P22518 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clk1P22518 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Clk1P22518 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clk1P22518 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Clk1P22518 Gm11780-201ENSMUST00000136880 516 ntBASIC14.07□□□□□ -0.16
Clk1P22518 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Clk1P22518 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.07□□□□□ -0.16
Clk1P22518 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms