Protein–RNA interactions for Protein: P18181

Cd48, CD48 antigen, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd48P18181 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cd48P18181 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Cd48P18181 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cd48P18181 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Cd48P18181 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cd48P18181 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cd48P18181 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.59□□□□□ -0.23
Cd48P18181 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cd48P18181 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cd48P18181 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cd48P18181 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cd48P18181 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cd48P18181 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cd48P18181 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cd48P18181 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cd48P18181 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
Cd48P18181 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC13.58□□□□□ -0.24
Cd48P18181 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cd48P18181 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cd48P18181 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cd48P18181 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cd48P18181 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cd48P18181 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cd48P18181 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cd48P18181 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Cd48P18181 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Cd48P18181 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cd48P18181 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cd48P18181 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Cd48P18181 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC13.58□□□□□ -0.24
Cd48P18181 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cd48P18181 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cd48P18181 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cd48P18181 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cd48P18181 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cd48P18181 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Cd48P18181 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cd48P18181 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cd48P18181 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cd48P18181 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Cd48P18181 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cd48P18181 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cd48P18181 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cd48P18181 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cd48P18181 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cd48P18181 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cd48P18181 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cd48P18181 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cd48P18181 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cd48P18181 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC13.57□□□□□ -0.24
Cd48P18181 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cd48P18181 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC13.57□□□□□ -0.24
Cd48P18181 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cd48P18181 AC124569.2-201ENSMUST00000225998 818 ntBASIC13.57□□□□□ -0.24
Cd48P18181 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cd48P18181 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cd48P18181 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC13.57□□□□□ -0.24
Cd48P18181 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Cd48P18181 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cd48P18181 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cd48P18181 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cd48P18181 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cd48P18181 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Cd48P18181 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cd48P18181 Gm5049-201ENSMUST00000195878 1590 ntBASIC13.57□□□□□ -0.24
Cd48P18181 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cd48P18181 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.57□□□□□ -0.24
Cd48P18181 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.57□□□□□ -0.24
Cd48P18181 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.57□□□□□ -0.24
Cd48P18181 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.57□□□□□ -0.24
Cd48P18181 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.57□□□□□ -0.24
Cd48P18181 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Cd48P18181 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cd48P18181 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cd48P18181 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cd48P18181 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cd48P18181 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Cd48P18181 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cd48P18181 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.56□□□□□ -0.24
Cd48P18181 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cd48P18181 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
Cd48P18181 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
Cd48P18181 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC13.56□□□□□ -0.24
Cd48P18181 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cd48P18181 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC13.56□□□□□ -0.24
Cd48P18181 AC158538.2-201ENSMUST00000225455 906 ntBASIC13.56□□□□□ -0.24
Cd48P18181 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cd48P18181 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cd48P18181 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cd48P18181 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cd48P18181 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cd48P18181 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cd48P18181 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cd48P18181 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cd48P18181 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cd48P18181 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Cd48P18181 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cd48P18181 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cd48P18181 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cd48P18181 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms