Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl1P12850 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl1P12850 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl1P12850 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl1P12850 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl1P12850 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl1P12850 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl1P12850 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl1P12850 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl1P12850 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Cxcl1P12850 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Cxcl1P12850 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cxcl1P12850 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl1P12850 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl1P12850 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl1P12850 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl1P12850 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Cxcl1P12850 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl1P12850 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl1P12850 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.53□□□□□ -0.4
Cxcl1P12850 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl1P12850 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Cxcl1P12850 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.52□□□□□ -0.4
Cxcl1P12850 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cxcl1P12850 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Cxcl1P12850 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cxcl1P12850 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cxcl1P12850 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cxcl1P12850 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cxcl1P12850 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cxcl1P12850 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cxcl1P12850 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Cxcl1P12850 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cxcl1P12850 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC12.52□□□□□ -0.41
Cxcl1P12850 Gm12497-201ENSMUST00000138778 237 ntBASIC12.52□□□□□ -0.41
Cxcl1P12850 Gm23547-201ENSMUST00000158210 271 ntBASIC12.52□□□□□ -0.41
Cxcl1P12850 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Cxcl1P12850 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Cxcl1P12850 Gm25745-201ENSMUST00000174945 133 ntBASIC12.52□□□□□ -0.41
Cxcl1P12850 Gm8318-201ENSMUST00000182954 872 ntBASIC12.52□□□□□ -0.41
Cxcl1P12850 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cxcl1P12850 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Cxcl1P12850 CT009510.1-201ENSMUST00000227972 270 ntBASIC12.52□□□□□ -0.41
Cxcl1P12850 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC12.52□□□□□ -0.41
Cxcl1P12850 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cxcl1P12850 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cxcl1P12850 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Cxcl1P12850 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cxcl1P12850 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cxcl1P12850 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cxcl1P12850 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cxcl1P12850 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cxcl1P12850 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cxcl1P12850 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.52□□□□□ -0.41
Cxcl1P12850 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cxcl1P12850 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cxcl1P12850 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cxcl1P12850 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cxcl1P12850 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cxcl1P12850 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Cxcl1P12850 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cxcl1P12850 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC12.52□□□□□ -0.41
Cxcl1P12850 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Cxcl1P12850 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cxcl1P12850 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Cxcl1P12850 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
Cxcl1P12850 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Cxcl1P12850 Gm45293-201ENSMUST00000209754 1812 ntBASIC12.51□□□□□ -0.41
Cxcl1P12850 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cxcl1P12850 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC12.51□□□□□ -0.41
Cxcl1P12850 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cxcl1P12850 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.51□□□□□ -0.41
Cxcl1P12850 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Cxcl1P12850 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC12.51□□□□□ -0.41
Cxcl1P12850 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Cxcl1P12850 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cxcl1P12850 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Cxcl1P12850 Gm10231-201ENSMUST00000181584 441 ntBASIC12.51□□□□□ -0.41
Cxcl1P12850 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cxcl1P12850 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC12.51□□□□□ -0.41
Cxcl1P12850 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cxcl1P12850 Gm10175-202ENSMUST00000208752 441 ntBASIC12.51□□□□□ -0.41
Cxcl1P12850 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cxcl1P12850 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC12.51□□□□□ -0.41
Cxcl1P12850 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cxcl1P12850 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cxcl1P12850 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cxcl1P12850 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cxcl1P12850 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cxcl1P12850 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cxcl1P12850 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cxcl1P12850 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cxcl1P12850 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cxcl1P12850 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.51□□□□□ -0.41
Cxcl1P12850 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Cxcl1P12850 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Cxcl1P12850 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcl1P12850 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcl1P12850 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Cxcl1P12850 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms