Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl3P10855 Gm27533-201ENSMUST00000183800 152 ntBASIC13.3□□□□□ -0.28
Ccl3P10855 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.3□□□□□ -0.28
Ccl3P10855 Gm7730-201ENSMUST00000212486 454 ntBASIC13.3□□□□□ -0.28
Ccl3P10855 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl3P10855 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Ccl3P10855 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Ccl3P10855 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Ccl3P10855 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.3□□□□□ -0.28
Ccl3P10855 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Ccl3P10855 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl3P10855 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl3P10855 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl3P10855 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl3P10855 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl3P10855 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl3P10855 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl3P10855 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Ccl3P10855 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl3P10855 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl3P10855 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Ccl3P10855 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl3P10855 Gm14719-201ENSMUST00000121891 340 ntBASIC13.29□□□□□ -0.28
Ccl3P10855 Gm27680-201ENSMUST00000184192 160 ntBASIC13.29□□□□□ -0.28
Ccl3P10855 Gm44344-201ENSMUST00000200287 129 ntBASIC13.29□□□□□ -0.28
Ccl3P10855 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl3P10855 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.29□□□□□ -0.28
Ccl3P10855 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.29□□□□□ -0.28
Ccl3P10855 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl3P10855 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl3P10855 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl3P10855 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Ccl3P10855 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Ccl3P10855 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl3P10855 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl3P10855 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl3P10855 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl3P10855 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl3P10855 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl3P10855 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Ccl3P10855 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl3P10855 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl3P10855 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl3P10855 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl3P10855 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl3P10855 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccl3P10855 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13.28□□□□□ -0.28
Ccl3P10855 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccl3P10855 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Ccl3P10855 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccl3P10855 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.28□□□□□ -0.28
Ccl3P10855 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ccl3P10855 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ccl3P10855 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Ccl3P10855 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccl3P10855 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ccl3P10855 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ccl3P10855 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ccl3P10855 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.28□□□□□ -0.28
Ccl3P10855 Gm16215-201ENSMUST00000161990 637 ntBASIC13.28□□□□□ -0.28
Ccl3P10855 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC13.28□□□□□ -0.28
Ccl3P10855 Gm43767-201ENSMUST00000198933 381 ntBASIC13.28□□□□□ -0.28
Ccl3P10855 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.28□□□□□ -0.28
Ccl3P10855 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccl3P10855 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccl3P10855 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccl3P10855 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.28□□□□□ -0.28
Ccl3P10855 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ccl3P10855 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccl3P10855 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.28□□□□□ -0.28
Ccl3P10855 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccl3P10855 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccl3P10855 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccl3P10855 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccl3P10855 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC13.28□□□□□ -0.28
Ccl3P10855 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccl3P10855 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ccl3P10855 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccl3P10855 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccl3P10855 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC13.28□□□□□ -0.28
Ccl3P10855 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ccl3P10855 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ccl3P10855 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Ccl3P10855 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ccl3P10855 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
Ccl3P10855 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
Ccl3P10855 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.27□□□□□ -0.29
Ccl3P10855 Gm7488-201ENSMUST00000117148 684 ntBASIC13.27□□□□□ -0.29
Ccl3P10855 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccl3P10855 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.27□□□□□ -0.29
Ccl3P10855 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.27□□□□□ -0.29
Ccl3P10855 Gm44855-201ENSMUST00000205725 362 ntBASIC13.27□□□□□ -0.29
Ccl3P10855 Gm7775-201ENSMUST00000218871 853 ntBASIC13.27□□□□□ -0.29
Ccl3P10855 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccl3P10855 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccl3P10855 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccl3P10855 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccl3P10855 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC13.27□□□□□ -0.29
Ccl3P10855 Syt7-205ENSMUST00000224135 1557 ntBASIC13.27□□□□□ -0.29
Ccl3P10855 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms