Protein–RNA interactions for Protein: P01788

Ig heavy chain V region H8, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01788 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
P01788 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC11.97□□□□□ -0.49
P01788 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC11.97□□□□□ -0.49
P01788 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
P01788 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
P01788 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
P01788 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P01788 Gm8242-201ENSMUST00000193029 1420 ntBASIC11.97□□□□□ -0.49
P01788 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
P01788 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P01788 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
P01788 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P01788 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC11.97□□□□□ -0.49
P01788 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P01788 Gm25016-201ENSMUST00000158399 131 ntBASIC11.97□□□□□ -0.49
P01788 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC11.97□□□□□ -0.49
P01788 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
P01788 Gm9172-201ENSMUST00000212092 954 ntBASIC11.97□□□□□ -0.49
P01788 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P01788 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P01788 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
P01788 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P01788 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
P01788 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
P01788 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC11.97□□□□□ -0.49
P01788 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
P01788 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
P01788 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
P01788 Sorbs3-204ENSMUST00000227929 2460 ntBASIC11.97□□□□□ -0.49
P01788 Gm38318-201ENSMUST00000195769 1706 ntBASIC11.97□□□□□ -0.49
P01788 Gm37912-201ENSMUST00000191895 3076 ntBASIC11.97□□□□□ -0.49
P01788 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P01788 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P01788 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
P01788 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
P01788 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
P01788 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
P01788 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
P01788 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
P01788 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
P01788 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
P01788 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
P01788 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
P01788 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
P01788 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
P01788 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
P01788 Gm25745-201ENSMUST00000174945 133 ntBASIC11.96□□□□□ -0.49
P01788 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
P01788 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC11.96□□□□□ -0.49
P01788 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
P01788 Gm19164-201ENSMUST00000210667 640 ntBASIC11.96□□□□□ -0.49
P01788 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC11.96□□□□□ -0.49
P01788 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
P01788 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
P01788 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
P01788 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
P01788 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC11.96□□□□□ -0.49
P01788 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
P01788 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
P01788 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
P01788 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
P01788 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
P01788 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
P01788 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
P01788 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
P01788 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
P01788 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.5
P01788 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
P01788 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
P01788 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
P01788 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC11.96□□□□□ -0.5
P01788 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
P01788 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
P01788 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
P01788 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
P01788 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
P01788 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
P01788 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
P01788 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
P01788 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
P01788 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
P01788 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
P01788 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
P01788 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
P01788 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
P01788 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
P01788 Gm12134-201ENSMUST00000122109 520 ntBASIC11.95□□□□□ -0.5
P01788 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC11.95□□□□□ -0.5
P01788 Rprl3-201ENSMUST00000157400 290 ntBASIC11.95□□□□□ -0.5
P01788 Gm23634-201ENSMUST00000175071 91 ntBASIC11.95□□□□□ -0.5
P01788 Gm6728-201ENSMUST00000178117 1065 ntBASIC11.95□□□□□ -0.5
P01788 Gm7286-201ENSMUST00000182691 1007 ntBASIC11.95□□□□□ -0.5
P01788 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC11.95□□□□□ -0.5
P01788 Gm18622-201ENSMUST00000219361 595 ntBASIC11.95□□□□□ -0.5
P01788 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
P01788 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
P01788 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
P01788 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
P01788 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
P01788 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms