Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Hdac3O88895 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hdac3O88895 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Hdac3O88895 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hdac3O88895 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hdac3O88895 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hdac3O88895 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hdac3O88895 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hdac3O88895 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Hdac3O88895 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hdac3O88895 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Hdac3O88895 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Hdac3O88895 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hdac3O88895 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hdac3O88895 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Hdac3O88895 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Hdac3O88895 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hdac3O88895 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC13.55□□□□□ -0.24
Hdac3O88895 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Hdac3O88895 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hdac3O88895 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hdac3O88895 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hdac3O88895 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hdac3O88895 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hdac3O88895 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Hdac3O88895 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hdac3O88895 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hdac3O88895 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hdac3O88895 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Hdac3O88895 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hdac3O88895 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Hdac3O88895 Gm8344-201ENSMUST00000119813 856 ntBASIC13.55□□□□□ -0.24
Hdac3O88895 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC13.55□□□□□ -0.24
Hdac3O88895 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC13.55□□□□□ -0.24
Hdac3O88895 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Hdac3O88895 Gm19164-201ENSMUST00000210667 640 ntBASIC13.55□□□□□ -0.24
Hdac3O88895 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC13.55□□□□□ -0.24
Hdac3O88895 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hdac3O88895 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hdac3O88895 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hdac3O88895 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hdac3O88895 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hdac3O88895 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hdac3O88895 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Hdac3O88895 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hdac3O88895 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Hdac3O88895 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hdac3O88895 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hdac3O88895 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hdac3O88895 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Hdac3O88895 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Hdac3O88895 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC13.55□□□□□ -0.24
Hdac3O88895 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Hdac3O88895 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Hdac3O88895 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hdac3O88895 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hdac3O88895 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Hdac3O88895 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hdac3O88895 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Hdac3O88895 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hdac3O88895 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Hdac3O88895 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.54□□□□□ -0.24
Hdac3O88895 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hdac3O88895 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hdac3O88895 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hdac3O88895 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hdac3O88895 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hdac3O88895 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hdac3O88895 Gm14722-201ENSMUST00000118943 689 ntBASIC13.54□□□□□ -0.24
Hdac3O88895 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Hdac3O88895 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC13.54□□□□□ -0.24
Hdac3O88895 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC13.54□□□□□ -0.24
Hdac3O88895 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Hdac3O88895 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC13.54□□□□□ -0.24
Hdac3O88895 Gm18622-201ENSMUST00000219361 595 ntBASIC13.54□□□□□ -0.24
Hdac3O88895 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hdac3O88895 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hdac3O88895 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hdac3O88895 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hdac3O88895 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hdac3O88895 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC13.54□□□□□ -0.24
Hdac3O88895 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hdac3O88895 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hdac3O88895 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hdac3O88895 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hdac3O88895 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hdac3O88895 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hdac3O88895 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hdac3O88895 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Hdac3O88895 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Hdac3O88895 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Hdac3O88895 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hdac3O88895 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hdac3O88895 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hdac3O88895 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hdac3O88895 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Hdac3O88895 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Hdac3O88895 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hdac3O88895 Gm7506-201ENSMUST00000207758 815 ntBASIC13.53□□□□□ -0.24
Hdac3O88895 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 89.3 ms