Protein–RNA interactions for Protein: O88253

Gm10226, Mszf39 (Fragment), mousemouse

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10226O88253 AC126250.1-201ENSMUST00000228343 1768 ntBASIC11.62□□□□□ -0.55
Gm10226O88253 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Gm10226O88253 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm10226O88253 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm10226O88253 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm10226O88253 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm10226O88253 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm10226O88253 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
Gm10226O88253 AC131743.5-201ENSMUST00000220775 1618 ntBASIC11.62□□□□□ -0.55
Gm10226O88253 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Gm10226O88253 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm10226O88253 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC11.62□□□□□ -0.55
Gm10226O88253 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Gm10226O88253 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Gm10226O88253 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC11.62□□□□□ -0.55
Gm10226O88253 Gm26308-201ENSMUST00000157768 69 ntBASIC11.62□□□□□ -0.55
Gm10226O88253 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Gm10226O88253 Gm5628-201ENSMUST00000222318 1049 ntBASIC11.62□□□□□ -0.55
Gm10226O88253 CT030684.1-201ENSMUST00000227292 914 ntBASIC11.62□□□□□ -0.55
Gm10226O88253 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm10226O88253 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Gm10226O88253 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm10226O88253 Gm10313-201ENSMUST00000095320 1002 ntBASIC11.62□□□□□ -0.55
Gm10226O88253 Gm13332-201ENSMUST00000120451 1398 ntBASIC11.62□□□□□ -0.55
Gm10226O88253 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC11.62□□□□□ -0.55
Gm10226O88253 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm10226O88253 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm10226O88253 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm10226O88253 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm10226O88253 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Gm10226O88253 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm10226O88253 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Gm10226O88253 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm10226O88253 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm10226O88253 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm10226O88253 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm10226O88253 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Gm10226O88253 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Gm10226O88253 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm10226O88253 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC11.61□□□□□ -0.55
Gm10226O88253 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Gm10226O88253 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm10226O88253 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Gm10226O88253 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm10226O88253 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm10226O88253 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
Gm10226O88253 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm10226O88253 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Gm10226O88253 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC11.61□□□□□ -0.55
Gm10226O88253 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Gm10226O88253 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Gm10226O88253 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Gm10226O88253 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC11.61□□□□□ -0.55
Gm10226O88253 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Gm10226O88253 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm10226O88253 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm10226O88253 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm10226O88253 BC037039-201ENSMUST00000192003 2205 ntBASIC11.61□□□□□ -0.55
Gm10226O88253 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm10226O88253 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm10226O88253 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm10226O88253 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Gm10226O88253 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Gm10226O88253 Gm14026-201ENSMUST00000120625 1789 ntBASIC11.61□□□□□ -0.55
Gm10226O88253 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm10226O88253 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Gm10226O88253 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Gm10226O88253 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC11.61□□□□□ -0.55
Gm10226O88253 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm10226O88253 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Gm10226O88253 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Gm10226O88253 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm10226O88253 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm10226O88253 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC11.61□□□□□ -0.55
Gm10226O88253 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Gm10226O88253 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC11.6□□□□□ -0.55
Gm10226O88253 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Gm10226O88253 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC11.6□□□□□ -0.55
Gm10226O88253 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Gm10226O88253 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Gm10226O88253 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC11.6□□□□□ -0.55
Gm10226O88253 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Gm10226O88253 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Gm10226O88253 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Gm10226O88253 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Gm10226O88253 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Gm10226O88253 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Gm10226O88253 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Gm10226O88253 Gm13365-201ENSMUST00000121188 973 ntBASIC11.6□□□□□ -0.55
Gm10226O88253 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Gm10226O88253 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Gm10226O88253 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Gm10226O88253 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Gm10226O88253 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Gm10226O88253 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Gm10226O88253 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Gm10226O88253 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Gm10226O88253 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Gm10226O88253 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Gm10226O88253 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 10.8 ms