Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pdlim1O70400 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Pdlim1O70400 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Pdlim1O70400 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
Pdlim1O70400 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Pdlim1O70400 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pdlim1O70400 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.9□□□□□ -0.02
Pdlim1O70400 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Pdlim1O70400 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Pdlim1O70400 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.9□□□□□ -0.02
Pdlim1O70400 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pdlim1O70400 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC14.9□□□□□ -0.02
Pdlim1O70400 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pdlim1O70400 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.9□□□□□ -0.02
Pdlim1O70400 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.9□□□□□ -0.02
Pdlim1O70400 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pdlim1O70400 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pdlim1O70400 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pdlim1O70400 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pdlim1O70400 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Pdlim1O70400 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pdlim1O70400 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pdlim1O70400 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pdlim1O70400 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pdlim1O70400 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pdlim1O70400 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pdlim1O70400 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.9□□□□□ -0.02
Pdlim1O70400 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pdlim1O70400 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Pdlim1O70400 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.9□□□□□ -0.02
Pdlim1O70400 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pdlim1O70400 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pdlim1O70400 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Pdlim1O70400 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pdlim1O70400 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
Pdlim1O70400 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pdlim1O70400 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Pdlim1O70400 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pdlim1O70400 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pdlim1O70400 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pdlim1O70400 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pdlim1O70400 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.89□□□□□ -0.03
Pdlim1O70400 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pdlim1O70400 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.89□□□□□ -0.03
Pdlim1O70400 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.89□□□□□ -0.03
Pdlim1O70400 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
Pdlim1O70400 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pdlim1O70400 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pdlim1O70400 Gm5177-201ENSMUST00000183092 997 ntBASIC14.89□□□□□ -0.03
Pdlim1O70400 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.89□□□□□ -0.03
Pdlim1O70400 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.89□□□□□ -0.03
Pdlim1O70400 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.89□□□□□ -0.03
Pdlim1O70400 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pdlim1O70400 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.89□□□□□ -0.03
Pdlim1O70400 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pdlim1O70400 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pdlim1O70400 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pdlim1O70400 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pdlim1O70400 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Pdlim1O70400 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Pdlim1O70400 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Pdlim1O70400 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pdlim1O70400 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.89□□□□□ -0.03
Pdlim1O70400 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pdlim1O70400 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pdlim1O70400 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pdlim1O70400 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pdlim1O70400 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pdlim1O70400 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pdlim1O70400 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pdlim1O70400 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.88□□□□□ -0.03
Pdlim1O70400 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pdlim1O70400 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pdlim1O70400 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pdlim1O70400 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Pdlim1O70400 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pdlim1O70400 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pdlim1O70400 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pdlim1O70400 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Pdlim1O70400 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pdlim1O70400 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pdlim1O70400 Mir3113-201ENSMUST00000175478 76 ntBASIC14.88□□□□□ -0.03
Pdlim1O70400 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Pdlim1O70400 Gm27301-201ENSMUST00000184012 127 ntBASIC14.88□□□□□ -0.03
Pdlim1O70400 Gm8000-201ENSMUST00000188378 592 ntBASIC14.88□□□□□ -0.03
Pdlim1O70400 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.88□□□□□ -0.03
Pdlim1O70400 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Pdlim1O70400 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pdlim1O70400 Thap2-203ENSMUST00000218989 527 ntBASIC14.88□□□□□ -0.03
Pdlim1O70400 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.88□□□□□ -0.03
Pdlim1O70400 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pdlim1O70400 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pdlim1O70400 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pdlim1O70400 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pdlim1O70400 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pdlim1O70400 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.88□□□□□ -0.03
Pdlim1O70400 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pdlim1O70400 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pdlim1O70400 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.88□□□□□ -0.03
Pdlim1O70400 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms