Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim3O70209 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim3O70209 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC13.71□□□□□ -0.21
Pdlim3O70209 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC13.71□□□□□ -0.21
Pdlim3O70209 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC13.71□□□□□ -0.21
Pdlim3O70209 Mir3081-201ENSMUST00000175305 84 ntBASIC13.71□□□□□ -0.21
Pdlim3O70209 Mir6982-201ENSMUST00000184354 68 ntBASIC13.71□□□□□ -0.21
Pdlim3O70209 Gm29518-201ENSMUST00000190858 372 ntBASIC13.71□□□□□ -0.21
Pdlim3O70209 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC13.71□□□□□ -0.21
Pdlim3O70209 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim3O70209 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim3O70209 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Pdlim3O70209 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim3O70209 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim3O70209 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim3O70209 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pdlim3O70209 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pdlim3O70209 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.71□□□□□ -0.22
Pdlim3O70209 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pdlim3O70209 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Pdlim3O70209 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pdlim3O70209 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pdlim3O70209 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Pdlim3O70209 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pdlim3O70209 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Pdlim3O70209 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pdlim3O70209 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim3O70209 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.7□□□□□ -0.22
Pdlim3O70209 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim3O70209 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim3O70209 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim3O70209 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim3O70209 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim3O70209 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim3O70209 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Pdlim3O70209 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim3O70209 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim3O70209 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim3O70209 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim3O70209 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim3O70209 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim3O70209 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim3O70209 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.7□□□□□ -0.22
Pdlim3O70209 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Pdlim3O70209 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim3O70209 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim3O70209 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Pdlim3O70209 Gm8344-201ENSMUST00000119813 856 ntBASIC13.7□□□□□ -0.22
Pdlim3O70209 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC13.7□□□□□ -0.22
Pdlim3O70209 Gm25016-201ENSMUST00000158399 131 ntBASIC13.7□□□□□ -0.22
Pdlim3O70209 Gm18622-201ENSMUST00000219361 595 ntBASIC13.7□□□□□ -0.22
Pdlim3O70209 AC158538.2-201ENSMUST00000225455 906 ntBASIC13.7□□□□□ -0.22
Pdlim3O70209 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Pdlim3O70209 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim3O70209 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim3O70209 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim3O70209 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim3O70209 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Pdlim3O70209 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Pdlim3O70209 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim3O70209 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Pdlim3O70209 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Pdlim3O70209 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Pdlim3O70209 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pdlim3O70209 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.7□□□□□ -0.22
Pdlim3O70209 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Pdlim3O70209 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim3O70209 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim3O70209 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
Pdlim3O70209 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim3O70209 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim3O70209 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim3O70209 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Pdlim3O70209 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Pdlim3O70209 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC13.69□□□□□ -0.22
Pdlim3O70209 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim3O70209 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim3O70209 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC13.69□□□□□ -0.22
Pdlim3O70209 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC13.69□□□□□ -0.22
Pdlim3O70209 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim3O70209 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim3O70209 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim3O70209 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim3O70209 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim3O70209 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim3O70209 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim3O70209 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim3O70209 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim3O70209 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Pdlim3O70209 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim3O70209 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim3O70209 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim3O70209 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim3O70209 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim3O70209 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim3O70209 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Pdlim3O70209 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Pdlim3O70209 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.68□□□□□ -0.22
Pdlim3O70209 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim3O70209 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms