Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rpl35aO55142 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
Rpl35aO55142 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rpl35aO55142 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Rpl35aO55142 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rpl35aO55142 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
Rpl35aO55142 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC11.27□□□□□ -0.61
Rpl35aO55142 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rpl35aO55142 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rpl35aO55142 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rpl35aO55142 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.61
Rpl35aO55142 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rpl35aO55142 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Rpl35aO55142 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Rpl35aO55142 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Rpl35aO55142 Gm18489-201ENSMUST00000172565 551 ntBASIC11.27□□□□□ -0.61
Rpl35aO55142 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC11.27□□□□□ -0.61
Rpl35aO55142 Gm4899-201ENSMUST00000178708 719 ntBASIC11.27□□□□□ -0.61
Rpl35aO55142 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC11.27□□□□□ -0.61
Rpl35aO55142 Gm8000-201ENSMUST00000188378 592 ntBASIC11.27□□□□□ -0.61
Rpl35aO55142 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Rpl35aO55142 Gm42670-201ENSMUST00000201816 1292 ntBASIC11.27□□□□□ -0.61
Rpl35aO55142 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC11.27□□□□□ -0.61
Rpl35aO55142 AC160980.1-201ENSMUST00000224136 970 ntBASIC11.27□□□□□ -0.61
Rpl35aO55142 AC131709.1-201ENSMUST00000224731 1180 ntBASIC11.27□□□□□ -0.61
Rpl35aO55142 AC159093.1-201ENSMUST00000227779 380 ntBASIC11.27□□□□□ -0.61
Rpl35aO55142 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rpl35aO55142 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rpl35aO55142 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Rpl35aO55142 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rpl35aO55142 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Rpl35aO55142 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rpl35aO55142 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rpl35aO55142 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Rpl35aO55142 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rpl35aO55142 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rpl35aO55142 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.27□□□□□ -0.61
Rpl35aO55142 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC11.26□□□□□ -0.61
Rpl35aO55142 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl35aO55142 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl35aO55142 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl35aO55142 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl35aO55142 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Rpl35aO55142 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl35aO55142 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl35aO55142 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Rpl35aO55142 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl35aO55142 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl35aO55142 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl35aO55142 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl35aO55142 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Rpl35aO55142 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC11.26□□□□□ -0.61
Rpl35aO55142 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl35aO55142 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Rpl35aO55142 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl35aO55142 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC11.26□□□□□ -0.61
Rpl35aO55142 Gm11594-201ENSMUST00000122313 162 ntBASIC11.26□□□□□ -0.61
Rpl35aO55142 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC11.26□□□□□ -0.61
Rpl35aO55142 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl35aO55142 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl35aO55142 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC11.26□□□□□ -0.61
Rpl35aO55142 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Rpl35aO55142 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl35aO55142 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl35aO55142 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC11.26□□□□□ -0.61
Rpl35aO55142 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC11.26□□□□□ -0.61
Rpl35aO55142 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl35aO55142 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl35aO55142 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl35aO55142 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl35aO55142 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl35aO55142 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl35aO55142 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl35aO55142 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl35aO55142 AC069562.2-201ENSMUST00000224644 2146 ntBASIC11.26□□□□□ -0.61
Rpl35aO55142 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl35aO55142 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl35aO55142 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpl35aO55142 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Rpl35aO55142 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC11.25□□□□□ -0.61
Rpl35aO55142 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC11.25□□□□□ -0.61
Rpl35aO55142 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rpl35aO55142 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rpl35aO55142 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rpl35aO55142 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rpl35aO55142 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rpl35aO55142 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rpl35aO55142 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rpl35aO55142 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Rpl35aO55142 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rpl35aO55142 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Rpl35aO55142 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rpl35aO55142 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC11.25□□□□□ -0.61
Rpl35aO55142 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC11.25□□□□□ -0.61
Rpl35aO55142 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rpl35aO55142 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC11.25□□□□□ -0.61
Rpl35aO55142 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rpl35aO55142 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rpl35aO55142 AC147366.1-201ENSMUST00000227671 852 ntBASIC11.25□□□□□ -0.61
Rpl35aO55142 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms