Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 AC123062.1-201ENSMUST00000221287 481 ntBASIC13.53□□□□□ -0.24
Dkk1O54908 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC13.53□□□□□ -0.24
Dkk1O54908 Rbfox2-207ENSMUST00000227533 1041 ntBASIC13.53□□□□□ -0.24
Dkk1O54908 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Dkk1O54908 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Dkk1O54908 Esp6-201ENSMUST00000097324 658 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Dkk1O54908 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Dkk1O54908 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Dkk1O54908 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Dkk1O54908 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Dkk1O54908 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Dkk1O54908 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC13.53□□□□□ -0.24
Dkk1O54908 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Dkk1O54908 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Dkk1O54908 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Dkk1O54908 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Dkk1O54908 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Dkk1O54908 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Dkk1O54908 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Dkk1O54908 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Dkk1O54908 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Dkk1O54908 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Dkk1O54908 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Dkk1O54908 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Dkk1O54908 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Dkk1O54908 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Dkk1O54908 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC13.52□□□□□ -0.25
Dkk1O54908 Vmn1r-ps132-201ENSMUST00000120434 892 ntBASIC13.52□□□□□ -0.25
Dkk1O54908 Gm8051-201ENSMUST00000120464 466 ntBASIC13.52□□□□□ -0.25
Dkk1O54908 Gm15227-201ENSMUST00000121844 399 ntBASIC13.52□□□□□ -0.25
Dkk1O54908 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.25
Dkk1O54908 Ptges3-ps-201ENSMUST00000160012 480 ntBASIC13.52□□□□□ -0.25
Dkk1O54908 Gm5930-202ENSMUST00000178002 489 ntTSL 5 BASIC13.52□□□□□ -0.25
Dkk1O54908 1700003C15Rik-201ENSMUST00000185360 1224 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Dkk1O54908 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Dkk1O54908 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC13.52□□□□□ -0.25
Dkk1O54908 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC13.52□□□□□ -0.25
Dkk1O54908 Gm18330-201ENSMUST00000199246 547 ntBASIC13.52□□□□□ -0.25
Dkk1O54908 Gm43093-201ENSMUST00000202439 1213 ntBASIC13.52□□□□□ -0.25
Dkk1O54908 Gm6590-201ENSMUST00000203343 687 ntBASIC13.52□□□□□ -0.25
Dkk1O54908 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
Dkk1O54908 Cers3-202ENSMUST00000208521 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Dkk1O54908 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC13.52□□□□□ -0.25
Dkk1O54908 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC13.52□□□□□ -0.25
Dkk1O54908 AC127302.2-201ENSMUST00000215212 268 ntBASIC13.52□□□□□ -0.25
Dkk1O54908 Gm18622-201ENSMUST00000219361 595 ntBASIC13.52□□□□□ -0.25
Dkk1O54908 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Dkk1O54908 AC159301.1-201ENSMUST00000225130 1182 ntBASIC13.52□□□□□ -0.25
Dkk1O54908 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.52□□□□□ -0.25
Dkk1O54908 AC125464.1-201ENSMUST00000228013 512 ntBASIC13.52□□□□□ -0.25
Dkk1O54908 AC117588.1-201ENSMUST00000228510 999 ntBASIC13.52□□□□□ -0.25
Dkk1O54908 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Dkk1O54908 Olfr547-201ENSMUST00000098229 936 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Dkk1O54908 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Dkk1O54908 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Dkk1O54908 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Dkk1O54908 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Dkk1O54908 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Dkk1O54908 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Dkk1O54908 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Dkk1O54908 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Dkk1O54908 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Dkk1O54908 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Dkk1O54908 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
Dkk1O54908 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Dkk1O54908 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Dkk1O54908 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Dkk1O54908 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Dkk1O54908 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Dkk1O54908 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Dkk1O54908 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Dkk1O54908 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Dkk1O54908 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Dkk1O54908 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Dkk1O54908 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Dkk1O54908 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC13.51□□□□□ -0.25
Dkk1O54908 Gm8097-201ENSMUST00000117903 829 ntBASIC13.51□□□□□ -0.25
Dkk1O54908 Gm14908-201ENSMUST00000120930 1286 ntBASIC13.51□□□□□ -0.25
Dkk1O54908 Gm16411-201ENSMUST00000122164 1100 ntBASIC13.51□□□□□ -0.25
Dkk1O54908 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC13.51□□□□□ -0.25
Dkk1O54908 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Dkk1O54908 4930551O13Rik-201ENSMUST00000145585 1065 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Dkk1O54908 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC13.51□□□□□ -0.25
Dkk1O54908 Gm28356-201ENSMUST00000186941 927 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Dkk1O54908 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Dkk1O54908 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Dkk1O54908 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC13.51□□□□□ -0.25
Dkk1O54908 Gm45299-202ENSMUST00000211011 765 ntTSL 5 BASIC13.51□□□□□ -0.25
Dkk1O54908 Gm21027-201ENSMUST00000219300 1236 ntBASIC13.51□□□□□ -0.25
Dkk1O54908 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC13.51□□□□□ -0.25
Dkk1O54908 Olfr724-201ENSMUST00000075030 1006 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Dkk1O54908 Csn2-201ENSMUST00000082370 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Dkk1O54908 Olfr206-201ENSMUST00000084791 1005 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Dkk1O54908 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Dkk1O54908 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Dkk1O54908 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Dkk1O54908 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Dkk1O54908 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Dkk1O54908 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Dkk1O54908 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms