Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Ercc2O08811 Gm1401-201ENSMUST00000122048 772 ntBASIC15.47■□□□□ 0.07
Ercc2O08811 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ercc2O08811 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC15.47■□□□□ 0.07
Ercc2O08811 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC15.47■□□□□ 0.07
Ercc2O08811 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ercc2O08811 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC15.47■□□□□ 0.07
Ercc2O08811 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ercc2O08811 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Ercc2O08811 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.47■□□□□ 0.07
Ercc2O08811 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ercc2O08811 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ercc2O08811 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ercc2O08811 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ercc2O08811 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ercc2O08811 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ercc2O08811 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
Ercc2O08811 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ercc2O08811 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.47■□□□□ 0.07
Ercc2O08811 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ercc2O08811 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Ercc2O08811 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ercc2O08811 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ercc2O08811 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ercc2O08811 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
Ercc2O08811 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Ercc2O08811 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.47■□□□□ 0.07
Ercc2O08811 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ercc2O08811 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Ercc2O08811 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
Ercc2O08811 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ercc2O08811 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ercc2O08811 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ercc2O08811 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ercc2O08811 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ercc2O08811 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ercc2O08811 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC15.46■□□□□ 0.07
Ercc2O08811 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Ercc2O08811 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC15.46■□□□□ 0.07
Ercc2O08811 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC15.46■□□□□ 0.07
Ercc2O08811 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ercc2O08811 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Ercc2O08811 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC15.46■□□□□ 0.07
Ercc2O08811 Psmb5-202ENSMUST00000227257 622 ntBASIC15.46■□□□□ 0.07
Ercc2O08811 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ercc2O08811 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ercc2O08811 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Ercc2O08811 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ercc2O08811 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.46■□□□□ 0.07
Ercc2O08811 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Ercc2O08811 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
Ercc2O08811 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Ercc2O08811 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
Ercc2O08811 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Ercc2O08811 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Ercc2O08811 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ercc2O08811 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ercc2O08811 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC15.45■□□□□ 0.06
Ercc2O08811 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ercc2O08811 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ercc2O08811 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ercc2O08811 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ercc2O08811 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ercc2O08811 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ercc2O08811 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.45■□□□□ 0.06
Ercc2O08811 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC15.45■□□□□ 0.06
Ercc2O08811 Gm14140-201ENSMUST00000119999 995 ntBASIC15.45■□□□□ 0.06
Ercc2O08811 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC15.45■□□□□ 0.06
Ercc2O08811 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC15.45■□□□□ 0.06
Ercc2O08811 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Ercc2O08811 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC15.45■□□□□ 0.06
Ercc2O08811 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ercc2O08811 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ercc2O08811 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ercc2O08811 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ercc2O08811 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15.45■□□□□ 0.06
Ercc2O08811 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ercc2O08811 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ercc2O08811 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Ercc2O08811 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ercc2O08811 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ercc2O08811 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ercc2O08811 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ercc2O08811 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ercc2O08811 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ercc2O08811 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.44■□□□□ 0.06
Ercc2O08811 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ercc2O08811 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ercc2O08811 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ercc2O08811 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC15.44■□□□□ 0.06
Ercc2O08811 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC15.44■□□□□ 0.06
Ercc2O08811 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC15.44■□□□□ 0.06
Ercc2O08811 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ercc2O08811 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.44■□□□□ 0.06
Ercc2O08811 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ercc2O08811 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ercc2O08811 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ercc2O08811 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ercc2O08811 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ercc2O08811 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms