Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc188F6WEU2 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Ccdc188F6WEU2 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC15.16■□□□□ 0.02
Ccdc188F6WEU2 Gm18054-201ENSMUST00000207539 555 ntBASIC15.16■□□□□ 0.02
Ccdc188F6WEU2 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC15.16■□□□□ 0.02
Ccdc188F6WEU2 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc188F6WEU2 Gm3695-201ENSMUST00000087222 1009 ntBASIC15.16■□□□□ 0.02
Ccdc188F6WEU2 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc188F6WEU2 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc188F6WEU2 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc188F6WEU2 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC15.16■□□□□ 0.02
Ccdc188F6WEU2 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc188F6WEU2 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc188F6WEU2 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Ccdc188F6WEU2 Gm42939-201ENSMUST00000197514 2205 ntBASIC15.16■□□□□ 0.02
Ccdc188F6WEU2 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc188F6WEU2 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc188F6WEU2 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc188F6WEU2 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC15.15■□□□□ 0.02
Ccdc188F6WEU2 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc188F6WEU2 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc188F6WEU2 AC154527.2-201ENSMUST00000225256 1466 ntBASIC15.15■□□□□ 0.02
Ccdc188F6WEU2 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc188F6WEU2 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Ccdc188F6WEU2 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Ccdc188F6WEU2 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc188F6WEU2 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
Ccdc188F6WEU2 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc188F6WEU2 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc188F6WEU2 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc188F6WEU2 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc188F6WEU2 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc188F6WEU2 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc188F6WEU2 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc188F6WEU2 Gm7561-201ENSMUST00000211203 886 ntBASIC15.15■□□□□ 0.02
Ccdc188F6WEU2 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
Ccdc188F6WEU2 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc188F6WEU2 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Ccdc188F6WEU2 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc188F6WEU2 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc188F6WEU2 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc188F6WEU2 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc188F6WEU2 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc188F6WEU2 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc188F6WEU2 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc188F6WEU2 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC15.15■□□□□ 0.02
Ccdc188F6WEU2 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc188F6WEU2 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc188F6WEU2 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc188F6WEU2 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc188F6WEU2 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc188F6WEU2 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc188F6WEU2 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc188F6WEU2 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc188F6WEU2 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc188F6WEU2 Gm5479-201ENSMUST00000160578 435 ntBASIC15.14■□□□□ 0.01
Ccdc188F6WEU2 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc188F6WEU2 Gm8565-201ENSMUST00000183259 1014 ntBASIC15.14■□□□□ 0.01
Ccdc188F6WEU2 Mir7070-201ENSMUST00000183657 86 ntBASIC15.14■□□□□ 0.01
Ccdc188F6WEU2 Gm43822-201ENSMUST00000200285 476 ntBASIC15.14■□□□□ 0.01
Ccdc188F6WEU2 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC15.14■□□□□ 0.01
Ccdc188F6WEU2 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
Ccdc188F6WEU2 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Ccdc188F6WEU2 Gm17383-201ENSMUST00000078739 1041 ntBASIC15.14■□□□□ 0.01
Ccdc188F6WEU2 Gm6091-201ENSMUST00000098307 165 ntBASIC15.14■□□□□ 0.01
Ccdc188F6WEU2 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc188F6WEU2 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc188F6WEU2 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc188F6WEU2 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc188F6WEU2 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc188F6WEU2 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc188F6WEU2 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc188F6WEU2 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc188F6WEU2 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.13■□□□□ 0.01
Ccdc188F6WEU2 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc188F6WEU2 Gm15808-201ENSMUST00000119046 604 ntBASIC15.13■□□□□ 0.01
Ccdc188F6WEU2 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc188F6WEU2 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Ccdc188F6WEU2 Gm8652-201ENSMUST00000181363 964 ntBASIC15.13■□□□□ 0.01
Ccdc188F6WEU2 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC15.13■□□□□ 0.01
Ccdc188F6WEU2 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Ccdc188F6WEU2 AC093022.1-201ENSMUST00000226949 1072 ntBASIC15.13■□□□□ 0.01
Ccdc188F6WEU2 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc188F6WEU2 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc188F6WEU2 Gm9823-201ENSMUST00000051212 327 ntBASIC15.13■□□□□ 0.01
Ccdc188F6WEU2 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC15.13■□□□□ 0.01
Ccdc188F6WEU2 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc188F6WEU2 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc188F6WEU2 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Ccdc188F6WEU2 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc188F6WEU2 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc188F6WEU2 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ccdc188F6WEU2 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
Ccdc188F6WEU2 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Ccdc188F6WEU2 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.12■□□□□ 0.01
Ccdc188F6WEU2 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc188F6WEU2 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc188F6WEU2 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc188F6WEU2 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc188F6WEU2 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms