Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Herc1E9PZP8 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Herc1E9PZP8 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
Herc1E9PZP8 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Herc1E9PZP8 Gm12816-201ENSMUST00000118069 1212 ntBASIC8.31□□□□□ -1.08
Herc1E9PZP8 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC8.31□□□□□ -1.08
Herc1E9PZP8 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Herc1E9PZP8 Gm5879-201ENSMUST00000089501 1209 ntBASIC8.31□□□□□ -1.08
Herc1E9PZP8 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Herc1E9PZP8 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Herc1E9PZP8 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC8.31□□□□□ -1.08
Herc1E9PZP8 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC8.31□□□□□ -1.08
Herc1E9PZP8 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Herc1E9PZP8 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Herc1E9PZP8 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC8.31□□□□□ -1.08
Herc1E9PZP8 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC8.31□□□□□ -1.08
Herc1E9PZP8 Gm9083-201ENSMUST00000120423 819 ntBASIC8.31□□□□□ -1.08
Herc1E9PZP8 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC8.31□□□□□ -1.08
Herc1E9PZP8 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC8.31□□□□□ -1.08
Herc1E9PZP8 Gm5070-201ENSMUST00000177599 862 ntBASIC8.31□□□□□ -1.08
Herc1E9PZP8 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Herc1E9PZP8 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Herc1E9PZP8 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC8.31□□□□□ -1.08
Herc1E9PZP8 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Herc1E9PZP8 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Herc1E9PZP8 Gm22331-201ENSMUST00000158066 136 ntBASIC8.3□□□□□ -1.08
Herc1E9PZP8 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Herc1E9PZP8 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Herc1E9PZP8 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Herc1E9PZP8 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Herc1E9PZP8 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Herc1E9PZP8 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Herc1E9PZP8 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC8.3□□□□□ -1.08
Herc1E9PZP8 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Herc1E9PZP8 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC8.3□□□□□ -1.08
Herc1E9PZP8 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Herc1E9PZP8 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Herc1E9PZP8 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Herc1E9PZP8 Gm45774-201ENSMUST00000211992 2665 ntBASIC8.3□□□□□ -1.08
Herc1E9PZP8 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Herc1E9PZP8 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC8.3□□□□□ -1.08
Herc1E9PZP8 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Herc1E9PZP8 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Herc1E9PZP8 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Herc1E9PZP8 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC8.3□□□□□ -1.08
Herc1E9PZP8 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Herc1E9PZP8 Gm5276-201ENSMUST00000196683 1047 ntBASIC8.3□□□□□ -1.08
Herc1E9PZP8 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC8.3□□□□□ -1.08
Herc1E9PZP8 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Herc1E9PZP8 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
Herc1E9PZP8 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Herc1E9PZP8 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
Herc1E9PZP8 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Herc1E9PZP8 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Herc1E9PZP8 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC8.3□□□□□ -1.08
Herc1E9PZP8 Gm4971-201ENSMUST00000205991 1108 ntBASIC8.3□□□□□ -1.08
Herc1E9PZP8 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Herc1E9PZP8 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC8.29□□□□□ -1.08
Herc1E9PZP8 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Herc1E9PZP8 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Herc1E9PZP8 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Herc1E9PZP8 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Herc1E9PZP8 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Herc1E9PZP8 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Herc1E9PZP8 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Herc1E9PZP8 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Herc1E9PZP8 Gm8194-201ENSMUST00000159783 859 ntBASIC8.29□□□□□ -1.08
Herc1E9PZP8 Gm44100-201ENSMUST00000204329 436 ntBASIC8.29□□□□□ -1.08
Herc1E9PZP8 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC8.29□□□□□ -1.08
Herc1E9PZP8 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Herc1E9PZP8 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Herc1E9PZP8 Gm43231-201ENSMUST00000202960 2258 ntBASIC8.29□□□□□ -1.08
Herc1E9PZP8 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Herc1E9PZP8 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Herc1E9PZP8 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Herc1E9PZP8 Gm14028-201ENSMUST00000117434 479 ntBASIC8.29□□□□□ -1.08
Herc1E9PZP8 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Herc1E9PZP8 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC8.29□□□□□ -1.08
Herc1E9PZP8 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Herc1E9PZP8 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Herc1E9PZP8 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Herc1E9PZP8 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Herc1E9PZP8 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Herc1E9PZP8 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Herc1E9PZP8 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC8.29□□□□□ -1.08
Herc1E9PZP8 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Herc1E9PZP8 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC8.29□□□□□ -1.08
Herc1E9PZP8 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Herc1E9PZP8 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Herc1E9PZP8 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
Herc1E9PZP8 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Herc1E9PZP8 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Herc1E9PZP8 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Herc1E9PZP8 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Herc1E9PZP8 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC8.29□□□□□ -1.08
Herc1E9PZP8 Gm27023-201ENSMUST00000182372 285 ntBASIC8.29□□□□□ -1.08
Herc1E9PZP8 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC8.29□□□□□ -1.08
Herc1E9PZP8 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC8.29□□□□□ -1.08
Herc1E9PZP8 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Herc1E9PZP8 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC8.29□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms