Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Gm43195-201ENSMUST00000200614 2332 ntBASIC17.31■□□□□ 0.36
Syce3B5KM66 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Syce3B5KM66 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Syce3B5KM66 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Syce3B5KM66 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Syce3B5KM66 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Syce3B5KM66 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
Syce3B5KM66 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Syce3B5KM66 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Syce3B5KM66 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Syce3B5KM66 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Syce3B5KM66 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC17.31■□□□□ 0.36
Syce3B5KM66 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Syce3B5KM66 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Syce3B5KM66 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Syce3B5KM66 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Syce3B5KM66 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Syce3B5KM66 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Syce3B5KM66 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Syce3B5KM66 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Syce3B5KM66 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Syce3B5KM66 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Syce3B5KM66 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC17.31■□□□□ 0.36
Syce3B5KM66 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Syce3B5KM66 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Syce3B5KM66 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Syce3B5KM66 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Syce3B5KM66 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Syce3B5KM66 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Syce3B5KM66 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Syce3B5KM66 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Syce3B5KM66 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Syce3B5KM66 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Syce3B5KM66 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Syce3B5KM66 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Syce3B5KM66 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Syce3B5KM66 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Syce3B5KM66 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC17.3■□□□□ 0.36
Syce3B5KM66 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC17.3■□□□□ 0.36
Syce3B5KM66 Gm4609-201ENSMUST00000106443 1002 ntBASIC17.3■□□□□ 0.36
Syce3B5KM66 Gm5138-201ENSMUST00000113842 1002 ntBASIC17.3■□□□□ 0.36
Syce3B5KM66 Gm15191-201ENSMUST00000117933 1000 ntBASIC17.3■□□□□ 0.36
Syce3B5KM66 Gm12182-201ENSMUST00000118655 1008 ntBASIC17.3■□□□□ 0.36
Syce3B5KM66 Gm13882-201ENSMUST00000120886 1002 ntBASIC17.3■□□□□ 0.36
Syce3B5KM66 Gm10284-201ENSMUST00000145057 1005 ntBASIC17.3■□□□□ 0.36
Syce3B5KM66 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Syce3B5KM66 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Syce3B5KM66 Gm10481-201ENSMUST00000179228 1002 ntBASIC17.3■□□□□ 0.36
Syce3B5KM66 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC17.3■□□□□ 0.36
Syce3B5KM66 Gm2574-201ENSMUST00000181051 1002 ntBASIC17.3■□□□□ 0.36
Syce3B5KM66 Gm3200-201ENSMUST00000181493 1002 ntBASIC17.3■□□□□ 0.36
Syce3B5KM66 Gm8825-201ENSMUST00000182565 998 ntBASIC17.3■□□□□ 0.36
Syce3B5KM66 Gm4518-201ENSMUST00000182638 718 ntBASIC17.3■□□□□ 0.36
Syce3B5KM66 Gm8330-201ENSMUST00000182754 1008 ntBASIC17.3■□□□□ 0.36
Syce3B5KM66 Gm4575-201ENSMUST00000182991 1002 ntBASIC17.3■□□□□ 0.36
Syce3B5KM66 Gm8709-201ENSMUST00000183230 1012 ntBASIC17.3■□□□□ 0.36
Syce3B5KM66 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Syce3B5KM66 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Syce3B5KM66 Gm10293-201ENSMUST00000076317 1002 ntBASIC17.3■□□□□ 0.36
Syce3B5KM66 Gm6316-201ENSMUST00000082064 1020 ntBASIC17.3■□□□□ 0.36
Syce3B5KM66 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Syce3B5KM66 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Syce3B5KM66 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Syce3B5KM66 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Syce3B5KM66 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Syce3B5KM66 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Syce3B5KM66 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Syce3B5KM66 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Syce3B5KM66 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Syce3B5KM66 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Syce3B5KM66 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC17.3■□□□□ 0.36
Syce3B5KM66 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Syce3B5KM66 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
Syce3B5KM66 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Syce3B5KM66 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Syce3B5KM66 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Syce3B5KM66 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Syce3B5KM66 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Syce3B5KM66 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Syce3B5KM66 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Syce3B5KM66 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Syce3B5KM66 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC17.29■□□□□ 0.36
Syce3B5KM66 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Syce3B5KM66 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC17.29■□□□□ 0.36
Syce3B5KM66 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.29■□□□□ 0.36
Syce3B5KM66 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.29■□□□□ 0.36
Syce3B5KM66 Gm22697-201ENSMUST00000175194 63 ntBASIC17.29■□□□□ 0.36
Syce3B5KM66 Gm22240-201ENSMUST00000175225 82 ntBASIC17.29■□□□□ 0.36
Syce3B5KM66 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.29■□□□□ 0.36
Syce3B5KM66 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Syce3B5KM66 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Syce3B5KM66 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Syce3B5KM66 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Syce3B5KM66 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Syce3B5KM66 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Syce3B5KM66 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
Syce3B5KM66 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Syce3B5KM66 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Syce3B5KM66 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Syce3B5KM66 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms